Transcript Information: S_Transcript_91364.p2


Annotated TAIR IDATMG00300.1
Annotated Gene NameGag-Pol-related retrotransposon family protein
Annotated Gene Symbol(s)ORF145A
Annotation TypeHomolog
Chromosome PositionchrM:89617-90054 | Reverse length=145
E-Value1E-06
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.033514611075
Replicate 21.4994128825496
Replicate 30.17905569013204
Condition 2: 8 Hour
Replicate 10.41408524887637
Replicate 20.21720241397793
Replicate 30.20694997674739
Condition 3: 24 Hour
Replicate 10.84834498992599
Replicate 20.22003700559561
Replicate 30.7346226525762


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_91364.p2 GENE.S_Transcript_91364~~S_Transcript_91364.p2 ORF type:5prime_partial len:103 (-),score=4.77,gag_pre-integrs|PF13976.2|2.3e-12,gag_pre-integrs|PF13976.2|3.6e+03 S_Transcript_91364:1289-1597(-)
TTTGCTTTAGTTACGCAATTTAATAGTAATTCTGAATTTGTTTTATGCCATTCTAGGCTTGGTCACATAAGACAAGATAAAATAAATAGACTAGCAAAAGATGGTCTTTTAGATCGTCTCACCAAGGTTAAGTTGCCTAGATGTGAGCCATGCTTAGTTGGCAAAGATAGAAAGAAGCCTTTCCGTAAGACTTCAAGGGCATCTAGTCCCTTAGAGTTAATCCATTCGGATATTTGCGGGCCAATGAATGTCAAAGCACAGCATGGTGGTGTGTACTTTCTCACCCTAATAGATGATTATTCACGATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_91364.p2 GENE.S_Transcript_91364~~S_Transcript_91364.p2 ORF type:5prime_partial len:103 (-),score=4.77,gag_pre-integrs|PF13976.2|2.3e-12,gag_pre-integrs|PF13976.2|3.6e+03 S_Transcript_91364:1289-1597(-)
FALVTQFNSNSEFVLCHSRLGHIRQDKINRLAKDGLLDRLTKVKLPRCEPCLVGKDRKKPFRKTSRASSPLELIHSDICGPMNVKAQHGGVYFLTLIDDYSR*

Click here to download the sequence:
Link to NCBI Protein BLAST