Transcript Information: S_Transcript_9148.p1


Annotated TAIR IDAT1G77800.1
Annotated Gene NamePHD finger family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:29253800-29260190 | Forward length=1375
E-Value9.7E-120
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 114.736365815533
Replicate 220.272607071488
Replicate 320.626744304027
Condition 2: 8 Hour
Replicate 119.922404112059
Replicate 222.028421138678
Replicate 321.175611765475
Condition 3: 24 Hour
Replicate 124.264108526285
Replicate 217.693677458727
Replicate 320.161042073826


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_9148.p1 GENE.S_Transcript_9148~~S_Transcript_9148.p1 ORF type:complete len:912 (+),score=207.90,zf-HC5HC2H_2|PF13832.2|1.7e+03,zf-HC5HC2H_2|PF13832.2|3.8e-21,zf-HC5HC2H|PF13771.2|7.1e+03,zf-HC5HC2H|PF13771.2|2.1e+03,zf-HC5HC2H|PF13771.2|2.6e-17,PHD_2|PF13831.2|1.1e-10,PHD_2|PF13831.2|1.8e+03,PHD_2|PF13831.2|11,PHD|PF00628.25|1.8e-06,PHD|PF00628.25|4.2 S_Transcript_9148:388-3123(+)
ATGACCGGAAACAGCCGATGTCATGGTTTGACGGCGATGATGGGTAGGGGAGCCGACGGAGGTTGCGGTACGGAGGAGAAGCCGTGCCCGTTGCCGAAGCTGACGTCACCGGCGGGGAAATCTCCGGCACCGGCGAACTCGCCGGAAAATCTGGAAACGGTGCGTTTAGGTGTGGACTTGTACACACAGGCTTTGAAAGCGCTTTCGGAGCGTTCGCCCTTCGATTCCGATGAAGCTTTGGCCACTAATGTCACCACTCTACCTAGTGGCTTGGCTAGTTTGCTGTCAAAGCACACAGATAGTAGAAGGAAGCACAAACGCCCTCATTCCGATACTAAGAAGTCACGTAAAGGCTCAACGGAGAAGTCGAAAGGTTCGAGTTTGTGGTCTGAGTTAGAAGATTACTTCAGGGAGCTGAAACGGCAAGATATTGAGAGGTTACATCGATTGTTTTCGTCATTTGGTTCGTCAGTGAGTAGTAATTCATGTTTTACAATTCCAGTTTTAGGTAATGCTCTTAGGAAGAAGAATAAGAAGAGGAAGGAAAATGAGAATAATAATGTTGATGATGTTGTTCAGACAGTTGTAGTAGCTAAGGAGGAGGCTGTGTGCTCTGATGTTCCCATTTCGGATTCCAGAGCCTTAGAAGTTGAGGAATTGGAGAGTAATGGTAAAGTTGAGCAGGTGATGGAAATAGATAATGGGAGTAGCAAGGATAGTATGGTTGTAGTTGAGCAGAGTCATGTGCCTGTGCTTGAATTGTCCTCCCCACAATCTTGTAGCAGTGTAGAGTGGGTTTTAGGCTCTAGGAACAGGGTTTTGTTGACGACCACGAGGCCAACAAAGAAAAGGAAGCTATTAGGTGAGACTGCAGGGTTGGAAAGGCTCATTGTTGCTCAGCCTTGTGAAGGCAGTACCACCTTATGTCATGTTTGTAGTATGGGAGACACAGGGGATCAGTTGAACCAGCTTGTTGTTTGCAAGTCTTGCAATGTTGTTGTTCATCAGAGATGTTATGGTGTGCAAGGAGAAATAGATGGGTCTTGGTTATGCTCTTGGTGTAAGCACAATTTGGATGCTAAAACTGGACAAGTTTCAGGCAGTGATAAACCTTGTGTTCTTTGTCCGAAGTCAGGTGGGGCTTTGAAGCGCTTTCGGAGACCCGGGAGTGGGAATGATGAATCTATTGAGTTTGCTCACTTGTTTTGTAGTCAGTGGATGCCTGAGGTTCACATTGATGATACAAGGTTGATGGAGCCTCTCTTGTGTCTAGATGGGATAAAGGATGTACGAACGAAGTTAGTGTGTAATTTGTGCAAAGTCAAGCTTGGTTCGTGTATACGGTGCAGTGATGGGTCATGCAGAACTTCATTTCACCCTATCTGTGCGAGGGAGGCAAAAAATAAGCTTGAGATATGGGGAAAGTTTGGGTGTGATGATATTGAATTACGGGCTTTCTGTGCAAAACATTCAGGGGCTGTTGGTTCTTCTGTGAAAAAAGAGGAAAAACATGCTGTTGTCAGTGATTCACCTGGTATCACGAATCAACCTGCAGTGTTGTCTGTAAATAAAATAAAGAAGCTGAAAATTGGCTGTAAGAATGGCAACAAAGTGACCTTCCACATTGGAGCAGCAGATGCTAAATCCAACCATTTGGGAGAACCTGAGGCACAAGGAATAGCATCGAAAGATGCAAAAGCAAAGGTTAAATTAGGATTAGATGAAGAGAAGGAGGTGAGCGATGTTGCGGCTCCGGAGAGGACCGCTAGTGAAGATGTGAAGACATCATATCTTCTGGATCTTGGTCTAGTTTTAAAGCAGCTAGTTGAACGAGGCAAAGTCAGCCCGAAGCAAATTGCTTCTGACATTGGCATCTCAGCAGATTCCTTAGCATCGAGACTCACTGACAATCATTTGGGTTCTGAGTTGTCCTGTAAGATATTAAAGTGGCTTAGAGATCATGCTTACATGGATACTCAACAAAAGGATTTGAGAGCTAAAGAGAGCTCCTTGGTTACTTCAAAGGCTGAGTTAGGAGCTGTTAATAGTACAGATTCTGTTGCAGTGAGAGATCTGGAGATGTCAGATGTTGTTCCGGTTAAGTCTGTTCCCCCAAGGCGGAGAACAGTTGGAAACATCAGGTTTTTGAAGGAGGACAAGGTTATGTCCATGTGGAATGATGGACTTATTGGGAATGGTCTATCAACTAATGATGGAATAGAGAAAGAATATGTGATTGAAGATTGTGATGCTTCTAATAAAGAGACAATTTCGGACGGCACTGGAGAGATTAGGGTTGAGACCACTGGATTTGAAGATCTACTAGAAGAAACTTCACCTACATCTGGAAGTTCTCGGTTGAAATCAGATAGTCCATGTGATGTTGAACGTGATGGAGCTGAGGAGGGTACTTCATCTGGAAAAAGTTCGTTGTTGGATATGGACCAGGATATTCCTTCTTGTTCTTCTGTAAATACAACAAGCTTTTTTGATGGAGATGTTGAACCTGGAAGAGATTCCTTTGTGCATCCGTATGTTCTAAAGAAGCTGGAAGAGGTGCAAAGTTGGATTATGCAAGGAACACCTCCTAGATTTGATGGTTGTGAAGAGCAAAAGATCTCTTTTCTCCAGTTCTTGTTTTCAGATCAGCTTCTTGGTAAGATTGTCGGATATGTTCCACACGAGATGGACATAGTCCGGCAGCAAAGATGGGATGATGTCCTTGATAACCAATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_9148.p1 GENE.S_Transcript_9148~~S_Transcript_9148.p1 ORF type:complete len:912 (+),score=207.90,zf-HC5HC2H_2|PF13832.2|1.7e+03,zf-HC5HC2H_2|PF13832.2|3.8e-21,zf-HC5HC2H|PF13771.2|7.1e+03,zf-HC5HC2H|PF13771.2|2.1e+03,zf-HC5HC2H|PF13771.2|2.6e-17,PHD_2|PF13831.2|1.1e-10,PHD_2|PF13831.2|1.8e+03,PHD_2|PF13831.2|11,PHD|PF00628.25|1.8e-06,PHD|PF00628.25|4.2 S_Transcript_9148:388-3123(+)
MTGNSRCHGLTAMMGRGADGGCGTEEKPCPLPKLTSPAGKSPAPANSPENLETVRLGVDLYTQALKALSERSPFDSDEALATNVTTLPSGLASLLSKHTDSRRKHKRPHSDTKKSRKGSTEKSKGSSLWSELEDYFRELKRQDIERLHRLFSSFGSSVSSNSCFTIPVLGNALRKKNKKRKENENNNVDDVVQTVVVAKEEAVCSDVPISDSRALEVEELESNGKVEQVMEIDNGSSKDSMVVVEQSHVPVLELSSPQSCSSVEWVLGSRNRVLLTTTRPTKKRKLLGETAGLERLIVAQPCEGSTTLCHVCSMGDTGDQLNQLVVCKSCNVVVHQRCYGVQGEIDGSWLCSWCKHNLDAKTGQVSGSDKPCVLCPKSGGALKRFRRPGSGNDESIEFAHLFCSQWMPEVHIDDTRLMEPLLCLDGIKDVRTKLVCNLCKVKLGSCIRCSDGSCRTSFHPICAREAKNKLEIWGKFGCDDIELRAFCAKHSGAVGSSVKKEEKHAVVSDSPGITNQPAVLSVNKIKKLKIGCKNGNKVTFHIGAADAKSNHLGEPEAQGIASKDAKAKVKLGLDEEKEVSDVAAPERTASEDVKTSYLLDLGLVLKQLVERGKVSPKQIASDIGISADSLASRLTDNHLGSELSCKILKWLRDHAYMDTQQKDLRAKESSLVTSKAELGAVNSTDSVAVRDLEMSDVVPVKSVPPRRRTVGNIRFLKEDKVMSMWNDGLIGNGLSTNDGIEKEYVIEDCDASNKETISDGTGEIRVETTGFEDLLEETSPTSGSSRLKSDSPCDVERDGAEEGTSSGKSSLLDMDQDIPSCSSVNTTSFFDGDVEPGRDSFVHPYVLKKLEEVQSWIMQGTPPRFDGCEEQKISFLQFLFSDQLLGKIVGYVPHEMDIVRQQRWDDVLDNQ*

Click here to download the sequence:
Link to NCBI Protein BLAST