Transcript Information: S_Transcript_91919.p1


Annotated TAIR IDAT3G44680.1
Annotated Gene Namehistone deacetylase 9
Annotated Gene Symbol(s)HDA9, HDA09
Annotation TypeOrtholog
Chromosome Positionchr3:16226769-16229752 | Reverse length=426
E-Value4.5E-133
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.1515240919068
Replicate 20.95463993277708
Replicate 30.79800300361733
Condition 2: 8 Hour
Replicate 11.8454664697519
Replicate 20.96801268152663
Replicate 32.1520807678106
Condition 3: 24 Hour
Replicate 10
Replicate 21.1985669583645
Replicate 30.60629914435375


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_91919.p1 GENE.S_Transcript_91919~~S_Transcript_91919.p1 ORF type:5prime_partial len:208 (+),score=47.67,Hist_deacetyl|PF00850.15|8e-63 S_Transcript_91919:2-625(+)
AATCTTGGAGAGGATTGCCCAGTTTTTGACAATCTGTTTGAGTTTTGCCAAATTTATGCCGGTGGAACCATTGATGCTGCCCGTAGGTTGAACAATAAACTTTGTGACATTGCTATAAATTGGGCTGGTGGATTGCACCATGCTAAGAAATGCGAGGCATCTGGATTTTGTTACATAAATGACTTGGTTTTGGGGATTTTGGAACTGTTGAAGTATCATGCCCGTGTTCTTTACATTGATATAGATGTGCATCATGGTGATGGTGTTGAAGAAGCATTCTATTTCACTGATAGAGTGATGACTGTCAGTTTCCATAAATTTGGAGATTTGTTCTTTCCTGGAACAGGAGATGTCAAGGAAATTGGAGAGAGAGAAGGAAAATACTATGCCATAAATGTTCCACTCAAGGATGGAATTGATGACACCAGCTTTACGAGACTTTTCAAGACCATTATTTCCAAGGTTGTTGAGTTTTATCAGCCAGGTGTGATTGTTCTACAGTGTGGGGCAGATTCACTAGCCGGTGACCGATTGGGCTGTTTCAACCTCTCCATTGATGGTGCTAGTCTTCTGTCTTTCAACAACGTTTTCTCTAATTATGAGATGCTAATTTTGTTGGAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_91919.p1 GENE.S_Transcript_91919~~S_Transcript_91919.p1 ORF type:5prime_partial len:208 (+),score=47.67,Hist_deacetyl|PF00850.15|8e-63 S_Transcript_91919:2-625(+)
NLGEDCPVFDNLFEFCQIYAGGTIDAARRLNNKLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKYYAINVPLKDGIDDTSFTRLFKTIISKVVEFYQPGVIVLQCGADSLAGDRLGCFNLSIDGASLLSFNNVFSNYEMLILLE*

Click here to download the sequence:
Link to NCBI Protein BLAST