Transcript Information: S_Transcript_92322.p1


Annotated TAIR IDAT2G05120.1
Annotated Gene NameNucleoporin, Nup133/Nup155-like
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:1842069-1846858 | Reverse length=1285
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.2571638171638
Replicate 26.6670524586009
Replicate 36.3931112271713
Condition 2: 8 Hour
Replicate 112.020642017495
Replicate 211.059482070581
Replicate 311.918883890653
Condition 3: 24 Hour
Replicate 14.938556930805
Replicate 25.4311168660727
Replicate 36.4813241463034


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_92322.p1 GENE.S_Transcript_92322~~S_Transcript_92322.p1 ORF type:complete len:1327 (+),score=315.42,Nucleoporin_N|PF08801.7|1.2e-36,Nucleoporin_C|PF03177.10|1.2e-09,Nucleoporin_C|PF03177.10|1.2e+02 S_Transcript_92322:229-4209(+)
ATGTTCTCACCAGCGGCAAGGAAGCAATCCAGGCAAAGCGCTGTCAAAAATCGAAATGCCGGCCATAAAATGCTTTCAGATTCTTCACCGGTAACTCCGTCTGTAGACCTTCGCAAATCATCTTTCGATAATAATAATCCGATCGCCAATCGCCCCAAAACCGGCACTCCTGCTCCTTGGGCCTCTCGTTTATCGGTTCTTGCCAGAATTCCTCCATCAAAGAAAAGTGAAACAGTAGATGATAGAGATGCAGTGGAGCCTGTGTATGTTGGAGAGTTTCCACAAGTTGTTCATGATGAACAAACTAAATTTCTGCGGAAATGTGTGCCAGGTGAAGCATGTATTGCAGGTGGAATGGACAAGGGAACTGCTTTGTCTTGGATGATTTGCGGAAGCAAACTTTTTATCTGGAGTTACCTATCACCTGCTGCTTCAAAGAAGTGTGTGGTTCTTGATCTTCCTTCTGATGATTCGCAAGTTAGCAATAACAATGCTTTTCTTGGTGATAATTGGTTGCTTTGTGTAATAAATCGGGACAATATTTACCAGAGCAACAATATAGTGAGGCAGTTGACATCAGCTGGAGTTGTTCTATGCAACCAGAAAACTCGAGCTATCATATTCTGGCCTGACATCTATTCAGATGATGGGGTAATTCCAGTTGTCAGTTTTGCATCTTCTCAAGAGCTGGAAATTGATTCACCTGGGCACGGTAAGAGTCCTTCAAGCAAACTGCAACCAAACAATAGGCATGAAAGCATATCAAATGAACCGTGTTCATTTAACTCCTTGATTGCTTGTGCAATCCCTTCCGATCATCATCATCACCGTGTTTGTGTTGCCCTTGCTACTAGTTCTAATGGTGAACTCTGGAAATTCTGTTGCACTCCCACTGGAATTCATCGTCAGAACATATCTCCTTTTGGTGGATGCAATCTATCTTCAGGGACTAACGGCTACCCTAGATCTCTTATTTGGCGTTTTCCATCTTGCTTGACAGGAGAGGCAAATAGGCAATTTTTCCTAGTAAATGACCATGAAATACAGTGTTTTTCCATTCAACTTTCAGCTAAACTAGACGTGACAAAAGTCTGGTCCCATGAATTCATTGGCACTGATAATGATCTAGGTATCAAGAAAGACTTAGCCGGTCAGAAGAGGATCTGGCCGTTGGATATTCAGGTAGATGAACGTGGTAAAGAAATTACCATCCTTGTTGCCATATATTGTAATGACCGAGTAAGCAGTTCAAGCTACACCCAGTATTCTCTTCTGACGATGCGGTATAAACCTGGTGTAGATGAAACTTCTAACAACTTTATGCATGGAGGTGTGTTGGAGAAGAAGGCTCCTGTACAGGTATTAATTCCAAAAGCAAGGGTGGAAAAAGAGGGATTCTTGTTTTCTATGAGATTGAGAGTTGGAGGCAAGCCTTCAGGATCTGCCATCATACTCTCTGGAGATGGAACTGCCACTGTCTCCTGTTTCTGGAGAAACTCAACCAGGCATTACCAATTTGATCTGCCTTATGATGCTGGGAAGGTGCTTGATGCATCAGTTTTCCCTACTACAGATGACAGTGAGGAGGGTGCATGGGTTGTATTAACTGAGAAAGCTGGAGTGTGGGCAATACCGGAGAAGGCTGTTTTATATGGTGGAGTTGAACCACCAGAGCGAAGTTTGTCACGCAAAGGGAGCTCAAACGGAAGATCTTCTGATGAGGAGAAGAAAATAGGTTCAATTGCAGAAAACTTTTCACCTGGAAACACTAGTGTTGATGCTCGTGATATTGTTAGCAAACAGAGGCCTGGTTTAACCGGGATTGCGTCCAGAACTGCTCAGGATGAAGAGGCAGAGGCTTTATTAAATCGTCTGTTTAATGATTTTCTTCTGTCAGGCCAGGTGGATGGATCTCTAGAGAAGCTAATGAATGTGCGGGCTTTTGAAAGGGATGGAGAAACTAATGCATTTGCTCGGGTAAGCAAATCAATTGTTGACACCTTAGCTAAGCATTGGACAACAACCAGAGGTGCTGAGATTGTTGCCTTAGCCATAGTATCGAACCAGCTAACAGAGAAGCAACAGATACATGAAAAATTTCTCCAGTTTCTTGCTTTATCCAAGTGCCATGAAGAACTATCTATGAAACAGAGACACGCGTTGCAAATCATATTGGAACATGGTGAAAAGCTCCTTGGCATAATTCAGCTTAGGGAACTACAAAACATTATCAGCCAGAACCGTTTTGGTGGAGTCAGTTCCCAGCATTCAAGCTTGGAAAGAGAAACTTCAGGTTCTTTATGGGATTTGATTCAGATAGTTGGTGAGACTGCCCGCAGAAATGCTGTTCTGCTGATGGATAGGGATAATGCAGAAGTGTTCTACAGCAAAATTTCTGATCTTGAACAAGTGTTTTATTGCTTGGACAGGCACTTGAATTATATTATCAGTGTGGAGCAGCCACTTAAGATTCAGGTTCAGAGAGCTTGTGAACTTTCTAAAGCTTGTGTTACACTAGTCCGCAGTGCCATGCACTACAAAAACGAGCACCACATGTGGTATCCACCTCCTGATGGCTTGGCACCATGGTATTGCCAGCGTGTTGTGCGTGATGGGCTCTGGAGTGTTGCTTCTCTCATGATTAAGACTCTGGATGATTCTACTGGAATTGACATATCTTCTAAGTCAGATATATGCTCCAATCTGGAAGTGCTAGCTGATGTTGTACTAGAGGCATATGTCGGTGCCATTACTGCAAAAATAGAGCGTGGGGAAGAACATAAGGGCCTCTTAGAAGAATATTGGAAAAGAAGGGATGACCTTCTTGACTCTCTATACCAACAGATCAAAGTATTTGTCAATGCTAGATGCCAGGATTCTGTTGGTGAGAATGGAGAACAGAAGGAAGTGATCCTCAGAGAACTGTCATCTAATCTGTTGTCTGTTGCAAGGCGGCATGAAGCATACCAGACTCTTTGGAATATCTGCTGTGACCTGAATGATTCCACGCTCCTTAAAGAGCTTATGCATGAAAGCTTGGGACCAAGGGGAGGATTCAGTTATTTTGTGTTTGAGCAATTATATGAGAACAAACAATTTTCAAAGCTTTTGAGGCTAGGGGAAGAGTTCCCACAAAAGCTGGTTACCTATCTGAAGGATCACAAGAATCTTATGTGGCTTCATGAGATATATCTTCATCAGTATTCTGCTGCTTCAAAAACTCTTCACGCTTTAGCACTTTCTGAAGATGGAAAATGGTTTCCTTCTACTGGGATGGAAGCAGAAGCAGACTCAGGAAAAGCGGAACTAACATTGCCAGAAAGGAGGCGTCTCTTACATCTCTCAAAGATAGCTGCAGTTGCAGGCAAAGATGCTGCTTTTGAGGCAGAACTTGCACGCATTGATGCGGACTTGAAGATTTTGAAGTCACAGGAGGATATATTGAAACTACTTCCTGATGACATGGACCAGCCACAAATTACAGAGCAGATTCTCCCCCCTTGGGATCTCATCAAATTGTGCCTCAAAGGTCAAACTCCAGAGCTACTGTTGAGGGCTTTTGATGTGTTTGCTTGGACGAGTTCTTCTTTCCGAAGATCCAATAAATCACTTTTGGAAGAGTGTTGGAAATGTGCGGTTGATCAGGATGACTGGGAGAAGCTCTATCAGTTCTACATTGCTGAAGGATGGAGTGATGAGGATACTTTACGGGTTCTGGAAAAAACTCTCCTTTTCCAGGCAACAAGGAGATGTTATGGTACAGAATCAGAAACGTACGATGGTGGTTTCGATGAAGTTTTGCCATTGAGGCAAGAGAGCATCGAGCTTCAGGGTATGAAGGATTCTGATTCCTCCATCGAAGCAATTTTGATGCAGCATAAAGACTTCTCAGATGCTGGAAAGCTGATGCTGACTGCAGTCAACTTGGCCACTGCCCAAGTTGATATCGGCGAGGAAGATGGGCCTATTCCAATGGAGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_92322.p1 GENE.S_Transcript_92322~~S_Transcript_92322.p1 ORF type:complete len:1327 (+),score=315.42,Nucleoporin_N|PF08801.7|1.2e-36,Nucleoporin_C|PF03177.10|1.2e-09,Nucleoporin_C|PF03177.10|1.2e+02 S_Transcript_92322:229-4209(+)
MFSPAARKQSRQSAVKNRNAGHKMLSDSSPVTPSVDLRKSSFDNNNPIANRPKTGTPAPWASRLSVLARIPPSKKSETVDDRDAVEPVYVGEFPQVVHDEQTKFLRKCVPGEACIAGGMDKGTALSWMICGSKLFIWSYLSPAASKKCVVLDLPSDDSQVSNNNAFLGDNWLLCVINRDNIYQSNNIVRQLTSAGVVLCNQKTRAIIFWPDIYSDDGVIPVVSFASSQELEIDSPGHGKSPSSKLQPNNRHESISNEPCSFNSLIACAIPSDHHHHRVCVALATSSNGELWKFCCTPTGIHRQNISPFGGCNLSSGTNGYPRSLIWRFPSCLTGEANRQFFLVNDHEIQCFSIQLSAKLDVTKVWSHEFIGTDNDLGIKKDLAGQKRIWPLDIQVDERGKEITILVAIYCNDRVSSSSYTQYSLLTMRYKPGVDETSNNFMHGGVLEKKAPVQVLIPKARVEKEGFLFSMRLRVGGKPSGSAIILSGDGTATVSCFWRNSTRHYQFDLPYDAGKVLDASVFPTTDDSEEGAWVVLTEKAGVWAIPEKAVLYGGVEPPERSLSRKGSSNGRSSDEEKKIGSIAENFSPGNTSVDARDIVSKQRPGLTGIASRTAQDEEAEALLNRLFNDFLLSGQVDGSLEKLMNVRAFERDGETNAFARVSKSIVDTLAKHWTTTRGAEIVALAIVSNQLTEKQQIHEKFLQFLALSKCHEELSMKQRHALQIILEHGEKLLGIIQLRELQNIISQNRFGGVSSQHSSLERETSGSLWDLIQIVGETARRNAVLLMDRDNAEVFYSKISDLEQVFYCLDRHLNYIISVEQPLKIQVQRACELSKACVTLVRSAMHYKNEHHMWYPPPDGLAPWYCQRVVRDGLWSVASLMIKTLDDSTGIDISSKSDICSNLEVLADVVLEAYVGAITAKIERGEEHKGLLEEYWKRRDDLLDSLYQQIKVFVNARCQDSVGENGEQKEVILRELSSNLLSVARRHEAYQTLWNICCDLNDSTLLKELMHESLGPRGGFSYFVFEQLYENKQFSKLLRLGEEFPQKLVTYLKDHKNLMWLHEIYLHQYSAASKTLHALALSEDGKWFPSTGMEAEADSGKAELTLPERRRLLHLSKIAAVAGKDAAFEAELARIDADLKILKSQEDILKLLPDDMDQPQITEQILPPWDLIKLCLKGQTPELLLRAFDVFAWTSSSFRRSNKSLLEECWKCAVDQDDWEKLYQFYIAEGWSDEDTLRVLEKTLLFQATRRCYGTESETYDGGFDEVLPLRQESIELQGMKDSDSSIEAILMQHKDFSDAGKLMLTAVNLATAQVDIGEEDGPIPME*

Click here to download the sequence:
Link to NCBI Protein BLAST