Transcript Information: S_Transcript_92327.p1


Annotated TAIR IDAT4G38150.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:17901211-17902119 | Reverse length=302
E-Value3.5E-86
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.0681949446022
Replicate 26.2893924982961
Replicate 36.5509266179305
Condition 2: 8 Hour
Replicate 113.509297033478
Replicate 211.540229615063
Replicate 311.284860496755
Condition 3: 24 Hour
Replicate 15.3870866526578
Replicate 24.6660788539539
Replicate 34.85039315483


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_92327.p1 GENE.S_Transcript_92327~~S_Transcript_92327.p1 ORF type:5prime_partial len:442 (+),score=127.47,PPR_2|PF13041.2|0.31,PPR_2|PF13041.2|6.6e-06,PPR_2|PF13041.2|1.2e-17,PPR_2|PF13041.2|1.1e-07,PPR_2|PF13041.2|0.00065,PPR_1|PF12854.3|8.1e+03,PPR_1|PF12854.3|1.6e-05,PPR_1|PF12854.3|4.5e-08,PPR_1|PF12854.3|9.8e-09,PPR_1|PF12854.3|1.7e-05,PPR|PF01535.16|39,PPR|PF01535.16|4.1e-06,PPR|PF01535.16|1.5e-06,PPR|PF01535.16|5.8e-05,PPR|PF01535.16|0.69,PPR_3|PF13812.2|1.9e+02,PPR_3|PF13812.2|0.15,PPR_3|PF13812.2|3.7e-05,PPR_3|PF13812.2|1.2,PPR_3|PF13812.2|6.1e+02 S_Transcript_92327:1-1326(+)
TGGGGAATCGAGGGCTCATTTGTATTCAACTGTTCATTTTGCCAAAAGGGTTTTCAGCAAAACTTGGACTTGAAGACTGAGATCATAGCAATGAGAGGTAAAGTTTCGGATCTCACTATTATTTCCAAGTTTTTCAATTGTGTATCAAATTCTTCACAACCCAATAAAGTAAATGGGATGGATTTACCTATGTTGATGAGATTAAGGCTGTTTAGTTCAATGGGTAGTGATACTGATAGAGGACAGTTTAGAAAAAGTGGGTTTAATAGTGATAAGGATGATAGTGATTATGTTGATGGTGAAAATGAAAAGTTTTCTGGGAGAGGTGGAGGTAATTTTGGTGCCCATCAAAATTATGCTCCTCCTAATCGTATCCCTGGTAGGCCTTTGAGAGGTGAGGGGCAAAACCGAGCGCAAAATCTGATACCAGGTCGAAATAGGCGGGGTGGTGGAAGGAATGATGGTTTTAGTAGAGGTGATGTGAAGTATAATGATGATATGTTGAAGTCTGATGGGAATGGTGAAGGTAGGAGGAATGTTGGTTTGGGTGGAGATGATGAGGGGCGGAAGGGTTCGAGGCCTTCGATTGACGAACTTTTGAATAGGCCGTTGAAGGGCGGTGAGAGGAGTGGAGATGATGGTGGTGAGTTTCTTGACAAGTTTAAGCTTGGTTGTGGTGATGATAAGGAGGAGAACGTGAATCAATCCGAGGAGGGGGAATCAACACCGAAGGTACAAGAGGAAAAGATGGAAGCTCCACAGGAGGCTGATGTGATCTTTAAGAAGATGAAACGAACGGGGCTTATTCCAAATGCTGTGGCTATGCTTGATGGGCTTTGTAGGGATGGTTTGGTCCAGGAAGCTATGAAGCTTTTTGGGGTGATGCGAGAGAAGGGGTCTATGCCGGAGGTTGTTGTGTATACTGCTGTGGTGGAGGGTTTTTGCAAAGCACATAAGTTTGATGATGCCAAGAGGATTTTCAGGAAGATGCAAAGTAATGGCATTGTGCCCAATGCTTTTAGTTACACTGTCTTGGTCAAAGGTCTCTGTAAGGGGAAGAGATTGGAGGATGCAGTTGATTTTTGTGTGGAGATGCTGGAAGCTGGTCATTCCCCCAATGTGGTTACATTCACTGGGCTTGTTCATGAGTTTTGTAAGGAGAAGGGTGTTGAAGATGCTCAAAAGGTCATTGGCACATTGAAGCAGAAGGGATTCTTTTTAGATGATAAAGCAGTTAGAGACTATCTAGATAAGACTGGCCCAACTTCACCGATGGTTTGGGAAGCAATTTTTGGGCCAAAGAAGACTACACAAAGAATAGTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_92327.p1 GENE.S_Transcript_92327~~S_Transcript_92327.p1 ORF type:5prime_partial len:442 (+),score=127.47,PPR_2|PF13041.2|0.31,PPR_2|PF13041.2|6.6e-06,PPR_2|PF13041.2|1.2e-17,PPR_2|PF13041.2|1.1e-07,PPR_2|PF13041.2|0.00065,PPR_1|PF12854.3|8.1e+03,PPR_1|PF12854.3|1.6e-05,PPR_1|PF12854.3|4.5e-08,PPR_1|PF12854.3|9.8e-09,PPR_1|PF12854.3|1.7e-05,PPR|PF01535.16|39,PPR|PF01535.16|4.1e-06,PPR|PF01535.16|1.5e-06,PPR|PF01535.16|5.8e-05,PPR|PF01535.16|0.69,PPR_3|PF13812.2|1.9e+02,PPR_3|PF13812.2|0.15,PPR_3|PF13812.2|3.7e-05,PPR_3|PF13812.2|1.2,PPR_3|PF13812.2|6.1e+02 S_Transcript_92327:1-1326(+)
WGIEGSFVFNCSFCQKGFQQNLDLKTEIIAMRGKVSDLTIISKFFNCVSNSSQPNKVNGMDLPMLMRLRLFSSMGSDTDRGQFRKSGFNSDKDDSDYVDGENEKFSGRGGGNFGAHQNYAPPNRIPGRPLRGEGQNRAQNLIPGRNRRGGGRNDGFSRGDVKYNDDMLKSDGNGEGRRNVGLGGDDEGRKGSRPSIDELLNRPLKGGERSGDDGGEFLDKFKLGCGDDKEENVNQSEEGESTPKVQEEKMEAPQEADVIFKKMKRTGLIPNAVAMLDGLCRDGLVQEAMKLFGVMREKGSMPEVVVYTAVVEGFCKAHKFDDAKRIFRKMQSNGIVPNAFSYTVLVKGLCKGKRLEDAVDFCVEMLEAGHSPNVVTFTGLVHEFCKEKGVEDAQKVIGTLKQKGFFLDDKAVRDYLDKTGPTSPMVWEAIFGPKKTTQRIV*

Click here to download the sequence:
Link to NCBI Protein BLAST