Transcript Information: S_Transcript_92574.p1


Annotated TAIR IDAT3G20980.1
Annotated Gene NameGag-Pol-related retrotransposon family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:7355963-7357966 | Forward length=405
E-Value0.0006
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.5156479243897
Replicate 26.2873234490327
Replicate 33.3923167407659
Condition 2: 8 Hour
Replicate 10.2762356258696
Replicate 20.9273305135638
Replicate 30.66266883746056
Condition 3: 24 Hour
Replicate 16.4515977148387
Replicate 26.8108863804567
Replicate 36.2728400593035


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_92574.p1 GENE.S_Transcript_92574~~S_Transcript_92574.p1 ORF type:complete len:386 (+),score=75.81 S_Transcript_92574:1923-3080(+)
ATGCTTGTTGATGTAAAAAAAGAGGTAGAAGGTTCTGCTCTATACAGTAGAGAGGTGAATACTACTGTTGTTTGTGAAGCATGTGGTCTCAAGGGACACCCCAAGGAGAAGTGTTGGACTGTGATTGGTTATCCACCATGGCATGCTAAAGGCAAAAAGGGTCCATTTGGACAAAGAGGATATGGTGCAAGGTCTTCAAGTTATAACAGAGGGAACTGGAATGGTCAAGGTAAGATAAGAAGTTCACCCAAGATTAACCCTCCTTCACCAAAAAGATTTGCTGGAAATGCACTACAACAGCCTGAAGATTTGAATGCTGTTGTTGCCATGTTAACCAATCTTCTCAAGTCAGTACCAAGTTCAAGTGGCAGCCAAAGACAAGGGAATGAAACTGACGAGGAGATGGACACTCAGTTTGCAGGTATGGCCTTTTGTCATAGTGTGGAAACAACTAATGATGACTGGATTATTGATACAGGGGCATCAGATCACATGGTTGCTGATTTGAACAAGTTAAGCAATGTAAAACCTATAAGAGTAAGATCTAAAATAAATTTGCCAAATGGAGGTATTGCCTGTGTCACTCATATTGGTGATGCAAAGTTAGAGAATGGGATGACTTTGAAAAATGTTTTATATGTTCTAGAATTTAAACAGAACCTGTTGTCTGTTCATAAGCTATTGATTGATGAAAACTGTCAAGTTTTGTTTAATAGAACTGACTGTATTATGCAGGATTGCACAACAAAGAGCATTAAAGGAATAGGAAGGGCAGCAGGTGGTCTCTACTATCTTACAAGCCAATCTAAGAAGAAGACAAACCTAGAATTCACTTTTGTTAAACCTAAGGCCAAAGTCACTTGTTTGACAACCAGTAGTTTTGATTCATCACCTGAGATTTGTAAAGACCTGAGTTTGGCTTGTAATAAACATGAATCAATGAAATCCAAAGTTTCTGAATATACCATTTGGCACAACAGATTGGGCCATGCACCCATTAGTAAATTGAAATTCATCCCTTGCATTAAACCATCTATAAAATCCTACAAGGATGTTATATGTTTGTCTTGTCCTATGGCCAAACACACAAAGCTTCCTTTTCTTCACAGGGAGACCACTGCTGCCTCACCATTTGCTCTTGTGCATATAGACATTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_92574.p1 GENE.S_Transcript_92574~~S_Transcript_92574.p1 ORF type:complete len:386 (+),score=75.81 S_Transcript_92574:1923-3080(+)
MLVDVKKEVEGSALYSREVNTTVVCEACGLKGHPKEKCWTVIGYPPWHAKGKKGPFGQRGYGARSSSYNRGNWNGQGKIRSSPKINPPSPKRFAGNALQQPEDLNAVVAMLTNLLKSVPSSSGSQRQGNETDEEMDTQFAGMAFCHSVETTNDDWIIDTGASDHMVADLNKLSNVKPIRVRSKINLPNGGIACVTHIGDAKLENGMTLKNVLYVLEFKQNLLSVHKLLIDENCQVLFNRTDCIMQDCTTKSIKGIGRAAGGLYYLTSQSKKKTNLEFTFVKPKAKVTCLTTSSFDSSPEICKDLSLACNKHESMKSKVSEYTIWHNRLGHAPISKLKFIPCIKPSIKSYKDVICLSCPMAKHTKLPFLHRETTAASPFALVHIDI*

Click here to download the sequence:
Link to NCBI Protein BLAST