Transcript Information: S_Transcript_92593.p1


Annotated TAIR IDAT3G20980.1
Annotated Gene NameGag-Pol-related retrotransposon family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:7355963-7357966 | Forward length=405
E-Value2E-05
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.1480118179882
Replicate 20.86520743362803
Replicate 30.79556900752787
Condition 2: 8 Hour
Replicate 11.3380637061731
Replicate 20.87732739763634
Replicate 30.58514091464655
Condition 3: 24 Hour
Replicate 10.51399725860222
Replicate 21.2442876943877
Replicate 30.69236984641495


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_92593.p1 GENE.S_Transcript_92593~~S_Transcript_92593.p1 ORF type:internal len:255 (+),score=18.34,gag_pre-integrs|PF13976.2|6e-07 S_Transcript_92593:1-762(+)
GCAGGTATGGCCTTTTGTCATAGTCTGCAAACCAGTAATGATAACTGGATCATTGATTCGGGTGCATCAGATCATATTGTGGCAGATTTAAAAATGTTAAGTAATGTGAAACCTATGAGAGTCAATTCGAAGATAAATCTGCCAAATGGAGGTATAGCATGTGTAACTCATATTGGTGATGCAAAGCTGGAAAATGGGATGATTTTAAAGAATGTCGTTTATGTTCCTCGGTTTAAACAAAATCTATTATCTGTATATAAGTTATTAGTTGATCAAAATTGTCAAGTGCTGTTTAACAGAACTGATTGCATAATGCAAGATTGCACAACCAAGAGCATTAAAGCAATCGGAAGGGCAGCAAGTGGTCTCTACTACCTAACTAATCAGCCAGAAAAGAAGACTTTATCCACTTTTTCTTCCGTTTTGCCTAAGACTAAAGTCACTTGTTTGACTGCCAACAATTTAAACTCTGTTTCCAATGAATGTAATACATTGAGTATGGGATGTAATGTTCAAACTTCAATGAAATCTAAAGTTTCTGAGTACTCTCTTTGGCACAATAGGTTGGGTCATGCACCCTTGAGTAAATTGAAATATTTACCTTGTGTCAAACCTTCATTGAAGACACATAAAGAAACCATTTGTTTGTCTTGTCCAATGGCTAAATACACGAAACTCCCTTTTTCTCACAGAGAGACCACTGTTGCCACTCCATTTGCTCTTGTGCATATAGATATTTGGGGACCTTACAGAGTTGCATAT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_92593.p1 GENE.S_Transcript_92593~~S_Transcript_92593.p1 ORF type:internal len:255 (+),score=18.34,gag_pre-integrs|PF13976.2|6e-07 S_Transcript_92593:1-762(+)
AGMAFCHSLQTSNDNWIIDSGASDHIVADLKMLSNVKPMRVNSKINLPNGGIACVTHIGDAKLENGMILKNVVYVPRFKQNLLSVYKLLVDQNCQVLFNRTDCIMQDCTTKSIKAIGRAASGLYYLTNQPEKKTLSTFSSVLPKTKVTCLTANNLNSVSNECNTLSMGCNVQTSMKSKVSEYSLWHNRLGHAPLSKLKYLPCVKPSLKTHKETICLSCPMAKYTKLPFSHRETTVATPFALVHIDIWGPYRVAY

Click here to download the sequence:
Link to NCBI Protein BLAST