Transcript Information: S_Transcript_92609.p1


Annotated TAIR IDAT5G27540.1
Annotated Gene NameMIRO-related GTP-ase 1
Annotated Gene Symbol(s)MIRO1, emb2473
Annotation TypeOrtholog
Chromosome Positionchr5:9722816-9727112 | Forward length=648
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 146.748109146449
Replicate 250.282636665964
Replicate 348.1512675423
Condition 2: 8 Hour
Replicate 158.851464751158
Replicate 252.964050965678
Replicate 354.165386394673
Condition 3: 24 Hour
Replicate 143.012406252798
Replicate 240.267795451929
Replicate 339.182152703762


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_92609.p1 GENE.S_Transcript_92609~~S_Transcript_92609.p1 ORF type:complete len:645 (+),score=139.61,EF_assoc_2|PF08356.8|1e-32,EF_assoc_2|PF08356.8|3.4e+03,EF_assoc_1|PF08355.8|8.5e+02,EF_assoc_1|PF08355.8|5.4e-19,Ras|PF00071.18|5e-14,Ras|PF00071.18|0.013,Roc|PF08477.9|4.7e-05,Roc|PF08477.9|1.7e+02,Roc|PF08477.9|1.9e+03,EF-hand_6|PF13405.2|0.3,EF-hand_6|PF13405.2|0.052,EF-hand_1|PF00036.28|0.43,EF-hand_1|PF00036.28|0.058 S_Transcript_92609:315-2249(+)
ATGGCGAAGGATTCGTCACCAGCTGGTAATAAGAATGGCATCAGAATCGTCGTCGCCGGTGACCGGGCCACTGGAAAGTCGAGCTTAATCGTGACGGCGGTGTCGGAGAGTTTTCCGACGAATGTTCCTCCGGTTTTGCCGCCTTCTCGCCTTCCCGATGACATGTTTCCCGATCGCGTCCCCATCACCATTATCGACACTTCCTCTGGTGTTGAGCAGAGGAATAGAGTCGGGGAGGAGCTGAAGCGTGCAGATGCAGTGGTGCTTACTTATGCGTGTGATCGCCCTGAAACTCTCGATCGTTTGAGTACTTATTGGCTTCCCGAGCTTCGTCGTTTGGAGGTGAAAGTTCCTGTCATAGTTGTTGGATGTAAATTGGATTTGAGGGATGAACAGCATCAAACAAGCCTAGAGCAGGTCATGTCCCCGATCATGCAGCAGTTTCGAGAGATTGAAACTTGCATAGAATGTTCTGCATCCAGACATATACAGATCCCTGAGGTCTTCTATTATGCCCAAAAAGCAGTACTTCATCCAACAGCACCATTATTTGACCAGGAAACACAAACTTTGAGGCCTCAATGTGTTCGGGCTTTGAAACGTATATTCATATTGTGTGACCATGACAAGGATGGTGCGCTGAGTGATGCAGAGTTGAATGATTTCCAGGTCAAATGCTTCAATGCTCCACTTCAACCTTCTGAAATTGTAGGTGTTAAGAGAGTCGTGCAAGAAAAGTTGCCTGAAGGGGTGAGCGAGCGTGGTCTTACTTTGCGGGGCTTTCTGTTCCTTCATGCACTTTTCATAGAAAAAGGGCGGCTGGAGACAACCTGGACTGTTCTGAGGAAGTTTGGATATAATAATGATATTAGGCTTGATGGCGATTTTCTTCCACCTTCATTCAAACGAGCACCAGACCAGAGTGTGGAGCTGACAAATGATGCTGTTGAGTGTTTGAAGGTGATTTTCAGTATGTATGACACTAATAATGATGGTGCCATACGGCCTGGGGATGTTGAAGACCTATTTTCTACAGCACCAGATTGTCCTTGGAGTGAAGGCCCATACAAGGATGCTGCACCAACAACCGCATTGGGGGGTATAACTATTGATGGGTTCCTGTCAGAGTGGGCCCTTATGACACTTCTCGAGCCAGCTAAAAGTGTGGAGTATCTGAAATATCTTATGTATGGTGGAGATGCTAGTTCAGCTATTCGTCTAACTAGGAAGAGACGTACAGATCGCAAGAAAAGGCAATCAGAAAGAAATGTTTACCAGTGTTTTGTCTTTGGACCAAAGAAGGCTGGCAAATCAGCACTACTAGATGCTTCTCTGGGAAGGCCATTCACTGATACTTACAGTGGAAACACTGATGAGCGATATGCTGTTAACGTTGTGGATGGGCCTTCGGGAAGCAGAAAGTACCTGGTTTTGCGAGAGATACCTGAAGAAAAAGTGAAAAAGCTTCTGTCTGACAAAGAATCTTTGGCTGCTTGTGACATTGCAATATTTGTATATGACAGCTCTGATGAACTTTCGTGGAAAAAGACAGCTGAATTGCTCATAGAGGTTGCTAGCCATGGAGAAGATACTGGGTATGAAGTGCCTTCCCTTATTGTGGCAGCTAAAGATGATCTGGATCCATATCCCATGGCAATCCATGATTCCACTAGGGTTAGCCAAGACATGGGTGTTGAAGCGCCTATCCCCATCAGTGCTAAGTTAGGGGACTTCAACAACATATTCAGAAGAATTGTGAGTTCAGCGGAGAATCCTCATTTGAGCATTCCTGAGACTGAAGCTGGTAGAAGCAGGAAGCAATACCACCGACTTGTCAACCGCTCTCTTATGTTTGTTTCAGTTGGAGCTGCTGTGGCTATAGTTGGATTGGCTGCTTATCGTGTTTACGCTGCAAGGAGAAACAGTTCTAGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_92609.p1 GENE.S_Transcript_92609~~S_Transcript_92609.p1 ORF type:complete len:645 (+),score=139.61,EF_assoc_2|PF08356.8|1e-32,EF_assoc_2|PF08356.8|3.4e+03,EF_assoc_1|PF08355.8|8.5e+02,EF_assoc_1|PF08355.8|5.4e-19,Ras|PF00071.18|5e-14,Ras|PF00071.18|0.013,Roc|PF08477.9|4.7e-05,Roc|PF08477.9|1.7e+02,Roc|PF08477.9|1.9e+03,EF-hand_6|PF13405.2|0.3,EF-hand_6|PF13405.2|0.052,EF-hand_1|PF00036.28|0.43,EF-hand_1|PF00036.28|0.058 S_Transcript_92609:315-2249(+)
MAKDSSPAGNKNGIRIVVAGDRATGKSSLIVTAVSESFPTNVPPVLPPSRLPDDMFPDRVPITIIDTSSGVEQRNRVGEELKRADAVVLTYACDRPETLDRLSTYWLPELRRLEVKVPVIVVGCKLDLRDEQHQTSLEQVMSPIMQQFREIETCIECSASRHIQIPEVFYYAQKAVLHPTAPLFDQETQTLRPQCVRALKRIFILCDHDKDGALSDAELNDFQVKCFNAPLQPSEIVGVKRVVQEKLPEGVSERGLTLRGFLFLHALFIEKGRLETTWTVLRKFGYNNDIRLDGDFLPPSFKRAPDQSVELTNDAVECLKVIFSMYDTNNDGAIRPGDVEDLFSTAPDCPWSEGPYKDAAPTTALGGITIDGFLSEWALMTLLEPAKSVEYLKYLMYGGDASSAIRLTRKRRTDRKKRQSERNVYQCFVFGPKKAGKSALLDASLGRPFTDTYSGNTDERYAVNVVDGPSGSRKYLVLREIPEEKVKKLLSDKESLAACDIAIFVYDSSDELSWKKTAELLIEVASHGEDTGYEVPSLIVAAKDDLDPYPMAIHDSTRVSQDMGVEAPIPISAKLGDFNNIFRRIVSSAENPHLSIPETEAGRSRKQYHRLVNRSLMFVSVGAAVAIVGLAAYRVYAARRNSSS*

Click here to download the sequence:
Link to NCBI Protein BLAST