Transcript Information: S_Transcript_92692.p1


Annotated TAIR IDAT3G60380.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein family protein (TAIR:AT4G16790.1); Has 6102 Blast hits to 3981 proteins in 424 species: Archae - 6; Bacteria - 372; Metazoa - 2603; Fungi - 655; Plants - 291; Viruses - 28; Other Eukaryotes - 2147 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:22316913-22319144 | Reverse length=743
E-Value3E-09
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.082546047521
Replicate 21.9272318448785
Replicate 32.2654862341093
Condition 2: 8 Hour
Replicate 12.1538838263892
Replicate 22.4631425708889
Replicate 32.1917113551983
Condition 3: 24 Hour
Replicate 11.2522544676137
Replicate 22.0622212535348
Replicate 31.216349730183


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_92692.p1 GENE.S_Transcript_92692~~S_Transcript_92692.p1 ORF type:complete len:1099 (+),score=280.11,DUF761|PF05553.7|4.1e-09 S_Transcript_92692:3871-7167(+)
ATGGAAGATGATCCATATCGTTACAGAAAGCTCCATTTTGGTCAGCAAAAGCTTAATAATCAATTTCAAGAAAACCCCACAAAGAGAGGTAAATCTTGCTCACATTTGTTTCTCAAATTTCTATTCATTGCTCTGTTTCTTTCTCTCATTCCCCTGTTTCCTTCTCAAGCTCCCGAATTTATTAGTGACACTATTTTTGCCAAAACTTGGGAGCTTTTTCATTTGCTCATAATTGGCATTGCTTTATCTTATGGCTTGTTTTGCCGCCCCAAAATAAGCTCCCAAATTCCAACCAAACCCCAGATTTCTCAACCATATGGGGCTAATATTCTTCACCATTCTTCAATTTTTGACTATGAGAATGAAAACCCATCTGCGGTTTCTGAGAAAAATGCAATCCCAACCCAAAGTTGTAATCGTTCTTATTATAGAACTGAACCCTTTGTGGTTGTGGGCAGAGAGGGTAGTAAAAACTATAATGAGAGGCCTTTGGGTTTGCCTGTTAGGAGCTTAAGGTCAAGAGTTTTGGATAGTGACAGTAGTAGTGGTGATAGTGATGATGATAAAGAGGGTGTTAGTGAATGTGAATCTGATTTTAGTAGTGTTTTTCCAAGAAATGCGAAAGGTGAGAACTTTGAAGGACATGAGCAAAAACCAAGGTCCATGAGGGTGAATTTCATGGTTGAGAATGATAATGTTGGGGAGAAATCTGAGCCTAAAGAGCTGAAATCTCAGTCTTTTAGGTCACCAACACTAGGATCAAATTGTCAAAAAAAATTTGGGTTTTGTTCTTGGCTGCCAGATTCACCAAATTGGCAACAACAACAACAACAACAGCCAATGTGGATCCCACCAAATGTGGATGGACAAAATTCTTGGAGGGTAGATAATTTTGGAATGCCATTTTCTGATCTTTCTACTCAAGGGAATGATTTCAATGTGATGGGTATATCACCAAACTTGCATGGTGGAAATGTAAGTGTAGAAAAGCCCATGTTTTTCATGTCTTCAGGTGGAACTCCTGGTTCAAATTCAATGCCAGCTTTCACCGGTGATTGCTCTTCAAGGCCAAGAAAACTTGGTCATGAGAATGTAAATTTGTTCCAGCCTTTTTCTGGGTTCTCCAGTCAAGGGAGTGATCCTAGTGTGATGGGTGTTTCACCAAACTTACAGAATGGAAATTTAATGCCTTCAACTGATGATTTAAGTTCAAGAAAACTCAGTCATGAGAATGTGAATTTGTGTCCACCATTTTCTGATTTCTCAACTCAAGGGAATGATCATAATATGATGGGTATTTCACCAAACTTACAGAGTGGAAATCTAAGTGCAGAAAAACCCCAGTTTTTCATGCCTCCGGCTGTGGTTTCTGCTGCAAAGCCAGCTCCCACTGATGATTGTGTATCAAGGTCAAGAAGATTCAGTCATGAGAATGTGAGGTTTTGCCAAACAGCAAACTTGGAGAATGGAATTTCAGATGGGGAGAAAGCCAATATATTCATGCCTTCAGCTGTAGCTCCATCTTCAGTTTCAGTACCTGACAAGGATTTCGTTTCCCCTGTTAAACCATCAAGGTCTAGAAGATTCAGTCACGACAATGGGAATCTGAGTAAATTGCCAAACGTAAAGAGTGGTGTCAAGTCTTCAGCTGCACCTGATCATTCAGTGTCAGGTCAGAATGATTTCATCACTGATGTAAGTGAAAATGCTAGTAAGGAAAATCCGAAACTTTTCGAAGCTTCAAATGGAGCTCCTGATGATTGTTCTTTAAGGTCAAGAAAGCACAATCACGCGAATGTGAATTTGTGCGAACCATCAAACTTAGAGGTTGAGACTTCAGGCGGGAACAAAGCCAACTTTGTCATGCCTTCAGCTGTAGCTCCATCTTCAGTTTCAGTCCCTGACAAGGATTTTGGTTCATCAGTTAAACCATCAAGGTCTCGAAGATTCAGTCATGACAATGGGAATTCGGGTAAATCAACAAACATTGAAAGCGAAAATTTGGGTGGAGAAAGAACCAATTCTGTCAAGCCTTCAGCTGCATGTCAACATTCTATGTCAGGCCCTGAAAATGCTTGTGCTTCATCAATTAAAAGGTCAATGTCTCGAAGAACCAATCGAGGGACTGCTCTTAAGAAGGATGAAAAAGGGTTAGAGAAAGATAATGTGGGAAATGTTAGGAAGGCAAATGATTCTTCTACCCCTTATTTGTTTGATCCACTTTCAGCACCAACTTCAAGAGATGATCTTACTTCATCAGTAGATGGTTCTTTTTTGAAAAAGGATGAGCAAAGAAAAATCCCAACTAGATGGGATGATGATTGTTTTGTGATACCATTATCAGAAAATAATGATAATAATAATGATGTAGGAAACTTGGAGCAAGAAAATCTTTCTCATGGGCAGGTTGCTTCTTCAGAATCAGCTGGTTCAATCAGTAGAAGATCTAGTGATGAACTTTGTGAAGCGGAAGAACATGTTCCATCGAGGGTATCGACAAATAGCTGTGAGATAGAAGAATTGGGGAGAGACAATATGGATTCATATAAACCTTCAACCCCATCTCCACCACCACCAATTCAAACACGAAGAAATGATGTGGTCTCACCGGTTGAATCGAGCTGTAACACCCTAGTCAAAGGACCCTCGTTTAGTGAGGATGATGATGACCTAGGATCACCTCCTACACCTGAAAGGAGGAAAGCTTTGTCGAAGGCATCACATTCTCGACGTTTTAGCTGTGCATCTTTCTTTGATAGGGATCTTAAGAGGAGCGAGTCAAAGGAAGCAAACAAGAAGAGCAAGGGAGATCAGTATGTGAGGGGAGGGAAATGCGGTTGGGATTGCTGGAAGTTGGATGTCAGACCAACTTTGGGTAAAGCGGCACTGAAAGGAAAGTCTGTGAGAACAATCAGGCCTCAAGAAACTCCTACAGAGACGAATGGACAGAGAAAAATTTCAGATGAAAGTGGAGCACCAAAGGGAAACAATCAGGAAATAATGGTTATACAGATTGGAATCACTGAAAAGCGATCAAATTCTAATGGTCGAAGAGGGGAGAAAAAGCAAGGAAGTGGTGGAACTTCTATCATATTGGGTTTGAACTCGAAGGAAAGCTCAAAGGGTAAAGTAGCTGCCCTTTGTGATGTTAAGGAGGAGGAAACTGATAACAACGAGATAGACAAGAAAGCAGACGAGTTCATAGCAAAGTTTAAGGAGCAGATTAGGCTTCAAAAGGTCAGTGCAGGGGCTGAATCGAGCAGGCAACAGCGTGCACATCAGAATTCTTTGTGGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_92692.p1 GENE.S_Transcript_92692~~S_Transcript_92692.p1 ORF type:complete len:1099 (+),score=280.11,DUF761|PF05553.7|4.1e-09 S_Transcript_92692:3871-7167(+)
MEDDPYRYRKLHFGQQKLNNQFQENPTKRGKSCSHLFLKFLFIALFLSLIPLFPSQAPEFISDTIFAKTWELFHLLIIGIALSYGLFCRPKISSQIPTKPQISQPYGANILHHSSIFDYENENPSAVSEKNAIPTQSCNRSYYRTEPFVVVGREGSKNYNERPLGLPVRSLRSRVLDSDSSSGDSDDDKEGVSECESDFSSVFPRNAKGENFEGHEQKPRSMRVNFMVENDNVGEKSEPKELKSQSFRSPTLGSNCQKKFGFCSWLPDSPNWQQQQQQQPMWIPPNVDGQNSWRVDNFGMPFSDLSTQGNDFNVMGISPNLHGGNVSVEKPMFFMSSGGTPGSNSMPAFTGDCSSRPRKLGHENVNLFQPFSGFSSQGSDPSVMGVSPNLQNGNLMPSTDDLSSRKLSHENVNLCPPFSDFSTQGNDHNMMGISPNLQSGNLSAEKPQFFMPPAVVSAAKPAPTDDCVSRSRRFSHENVRFCQTANLENGISDGEKANIFMPSAVAPSSVSVPDKDFVSPVKPSRSRRFSHDNGNLSKLPNVKSGVKSSAAPDHSVSGQNDFITDVSENASKENPKLFEASNGAPDDCSLRSRKHNHANVNLCEPSNLEVETSGGNKANFVMPSAVAPSSVSVPDKDFGSSVKPSRSRRFSHDNGNSGKSTNIESENLGGERTNSVKPSAACQHSMSGPENACASSIKRSMSRRTNRGTALKKDEKGLEKDNVGNVRKANDSSTPYLFDPLSAPTSRDDLTSSVDGSFLKKDEQRKIPTRWDDDCFVIPLSENNDNNNDVGNLEQENLSHGQVASSESAGSISRRSSDELCEAEEHVPSRVSTNSCEIEELGRDNMDSYKPSTPSPPPPIQTRRNDVVSPVESSCNTLVKGPSFSEDDDDLGSPPTPERRKALSKASHSRRFSCASFFDRDLKRSESKEANKKSKGDQYVRGGKCGWDCWKLDVRPTLGKAALKGKSVRTIRPQETPTETNGQRKISDESGAPKGNNQEIMVIQIGITEKRSNSNGRRGEKKQGSGGTSIILGLNSKESSKGKVAALCDVKEEETDNNEIDKKADEFIAKFKEQIRLQKVSAGAESSRQQRAHQNSLW*

Click here to download the sequence:
Link to NCBI Protein BLAST