Transcript Information: S_Transcript_92741.p1


Annotated TAIR IDAT5G01980.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:375542-377023 | Forward length=493
E-Value8.3E-118
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 118.125611652069
Replicate 218.405534351584
Replicate 315.684633209837
Condition 2: 8 Hour
Replicate 121.709631584108
Replicate 220.759463152179
Replicate 321.507882268089
Condition 3: 24 Hour
Replicate 115.862140624702
Replicate 217.477678116535
Replicate 315.860348643938


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_92741.p1 GENE.S_Transcript_92741~~S_Transcript_92741.p1 ORF type:complete len:555 (+),score=126.45,zf-RING_2|PF13639.2|3.2e+02,zf-RING_2|PF13639.2|8.3e-10 S_Transcript_92741:4033-5697(+)
ATGGATGTGGAAACACAGAGTGTTCTGCAGCAATCGCCACAGTCAAGTTTGCTTGATCACATTAATAATGGTTTCACAGTTGATCATCTAGACATGCCTGTGGTATGTGCTCTTTGCCGTAAAACTCTTTCAGCAGATGTTGAGGTTGACAACGGTCTCCAAGCTGTCAGCTTATGTGGTGACTGTAAATTTCTAATGCTTGAAGATCTTGGGACCCCGGCACGTGAATCTCACCGTAGAAGCTTACATAGAAGAAGAATAAGGAGGAGTTCAATGTATGGTAGTTCGGAGTCAATTGAGAATCTTTTCTCACAACAGTTTTCTCAAATGATTAATTTAGCCAGGCACATTGACCCTGAACATGAAGTTCCTCTTGGAGATATTGATTCTAATTTTAGGTTACAGCAGCCAGCAAGTTCACATACTACACCAAATGGTTCTAGAAGATGGCGGAGAATAATTTCTGATACTGAAAGTGACGGCTTCAACTCAGACTCTTTTTATGGGGAAACTGAATCAAATGTTAGCTTAGGTGGTGGATACAGGGTTTCTCATGGTGACAGTGACGCCCTATCTTTTAGTGCTTATGGAGGTGACTCAGATGCTTCTGTTGATGGCCATACTCTCTTTGATACGGACATATTTGTCCAGTCCATGATGAGAAGTGAAATTGACACTGACTCTGATATAGATCCAATGCATGCTGGTTCTGTACAGTGGAATTCTGATGATCGCGAAGCAGTAGAAAATGATAATGAGTGGGAAGAAGTTGACGCCGAGGAACATGAAGCTCGGTCTCCTGAAGTTGGAGCTTATGCTGACACAAGTGGAGGTAGTGATACTTTATTTAGACTTAGACGAACAACAGATTCTTCTGAATTTGAAGGACTTGTTCATTGGAGAGTCAGGGAAGGTAGGCTCCTTGAGTTTCCAAGCAATTTTACAACCATGGAAGAGGCCAATGATACACGCTATCTTGGTAACCCTGGGGACTACCTTGATGCTCGAGAATTTGAAGAATTTCTGGAGCATCTTGCTGAGGCTGACAATTCAAGACGAGGAGCACCTCCTGCTGCTGTGTCCTTTGTTAATAATCTGCCCATTGTAGTCATCAATGAGGAGCATCAGAAACCTGATGGTGTAGCATGTGCAGTCTGCAAAGATCTATTGACAATTGGCTCTGAAGCTTACCAATTGCCCTGCCTTCATCTCTATCATCCATCCTGCATCTTGCCATGGCTGAGTACACGTAACTCCTGTCCACTTTGTCGTTTTGAACTTCCAACTGATGACATAGATTATGAGGAGGGCAAGCACAATGCTCGGAGTAGAATGGTTATTACTGAAATTCAACAGCAGGATGGTAGGGATGATAGCTCCTCTATTGTTACTGATGTAAGTGAATTAGTCGAGACCCAAGAACTTGGGGAGTTGTTGGGAGATGTAGGCCCCACGGAAGATGTATCACGCACAAGTGGTGGGAGGGGAAGATGGTTGTTTTTGGCAGCGGCCCCTATAGTTGGCCTCATGGGTATAGCCATCGTGCTCTGGTTGGGGAATCCTCTTACAGGAGGAAGATGTCAGATCGTGGAGCGTTCTCAACATATATATAATTCTGACTCAGGCCCGCGCAACCAGCGGGCTAGAAGGTGGTGGTGGTTTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_92741.p1 GENE.S_Transcript_92741~~S_Transcript_92741.p1 ORF type:complete len:555 (+),score=126.45,zf-RING_2|PF13639.2|3.2e+02,zf-RING_2|PF13639.2|8.3e-10 S_Transcript_92741:4033-5697(+)
MDVETQSVLQQSPQSSLLDHINNGFTVDHLDMPVVCALCRKTLSADVEVDNGLQAVSLCGDCKFLMLEDLGTPARESHRRSLHRRRIRRSSMYGSSESIENLFSQQFSQMINLARHIDPEHEVPLGDIDSNFRLQQPASSHTTPNGSRRWRRIISDTESDGFNSDSFYGETESNVSLGGGYRVSHGDSDALSFSAYGGDSDASVDGHTLFDTDIFVQSMMRSEIDTDSDIDPMHAGSVQWNSDDREAVENDNEWEEVDAEEHEARSPEVGAYADTSGGSDTLFRLRRTTDSSEFEGLVHWRVREGRLLEFPSNFTTMEEANDTRYLGNPGDYLDAREFEEFLEHLAEADNSRRGAPPAAVSFVNNLPIVVINEEHQKPDGVACAVCKDLLTIGSEAYQLPCLHLYHPSCILPWLSTRNSCPLCRFELPTDDIDYEEGKHNARSRMVITEIQQQDGRDDSSSIVTDVSELVETQELGELLGDVGPTEDVSRTSGGRGRWLFLAAAPIVGLMGIAIVLWLGNPLTGGRCQIVERSQHIYNSDSGPRNQRARRWWWF*

Click here to download the sequence:
Link to NCBI Protein BLAST