Transcript Information: S_Transcript_93353.p1


Annotated TAIR IDAT5G27830.4
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to oxidative stress; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Folate receptor, conserved region (InterPro:IPR018143).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:9861203-9862742 | Forward length=322
E-Value2.5E-78
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.8530311994899
Replicate 27.0509946008553
Replicate 35.1335450954352
Condition 2: 8 Hour
Replicate 17.1084634390443
Replicate 28.5335917491741
Replicate 36.8122811933446
Condition 3: 24 Hour
Replicate 16.0805345798561
Replicate 25.9190710646131
Replicate 35.7204636795109


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_93353.p1 GENE.S_Transcript_93353~~S_Transcript_93353.p1 ORF type:5prime_partial len:291 (+),score=51.91,Folate_rec|PF03024.10|8.7e-18 S_Transcript_93353:2-874(+)
CTTGGGACCGGCAATGAGTACTCAAACCAAGGCTTAAGCACTCACAGGCGGAGTTACTCCAATGCAGAGAAATCAAATGGAGTGTGCGGTTCACCGGGGGGGCACTTTCATCCATTCTCGTCAGAAGGGAAACCTCCAAGAAAGGTTAGAGATTTGACCCTCTGCAGGATGTTTAGAAGAAGGACCTGCTGTGATTTGTCACATACGCATTCTGCTTTGCTGACCATTCGGAAGCTGGCATCGACAGGGGAAGCAAACCAAGAGTGCCTACACTTATGGGAATTATTGGAGTGCTCACTTTGTGATCCAAATGTTGGTGTTAAGCCTGGACCTCCTTTGATATGTGCCTCTTTTTGTGAAAGACTGTACCAAGCTTGTTCGGGTGCATATTTCTCTATGGATGCTATAACACAGGTCATCTCACCATGCGGGGTAGGCGACTTTGTTTGTGGTCGGGCATCTGAATGGATCTCTAATGGTACAGAACTCTGCCGAGCTGCAGGTTTTGCTGTTAGTCCAGTTGGAAGTCCTGACACTAGCATTGATGAGAAATCTTGTTATGGTGGGCAAGCAAGTCTAGATTCCATTTCAGAGTCATGGAGCGCTTCCCAGACTGGGACATTTCAGAAGGATGAGCAGATTGGATTGTTGGAAGATTTCCACCAGTGGCTGATGGAAATGCCTTTTACTGAAAAAGTTTCATGGGCAGTAGGGGGATTGGTGCTTACTGCTGGCCTGTTCTTTATGAGTAAAAGGAGGAGCTACAGCCGACGGCAGAAACATGCTGCGATTGTACGTGCAGCTAGATTGGAGGCATTATCAGGGCAAAGAACACCTACTGCTATCCATCAAAGGAAGGCTGGTGTGAGATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_93353.p1 GENE.S_Transcript_93353~~S_Transcript_93353.p1 ORF type:5prime_partial len:291 (+),score=51.91,Folate_rec|PF03024.10|8.7e-18 S_Transcript_93353:2-874(+)
LGTGNEYSNQGLSTHRRSYSNAEKSNGVCGSPGGHFHPFSSEGKPPRKVRDLTLCRMFRRRTCCDLSHTHSALLTIRKLASTGEANQECLHLWELLECSLCDPNVGVKPGPPLICASFCERLYQACSGAYFSMDAITQVISPCGVGDFVCGRASEWISNGTELCRAAGFAVSPVGSPDTSIDEKSCYGGQASLDSISESWSASQTGTFQKDEQIGLLEDFHQWLMEMPFTEKVSWAVGGLVLTAGLFFMSKRRSYSRRQKHAAIVRAARLEALSGQRTPTAIHQRKAGVR*

Click here to download the sequence:
Link to NCBI Protein BLAST