Transcript Information: S_Transcript_93384.p1


Annotated TAIR IDAT1G45474.1
Annotated Gene Namephotosystem I light harvesting complex gene 5
Annotated Gene Symbol(s)LHCA5
Annotation TypeOrtholog
Chromosome Positionchr1:17179353-17180439 | Forward length=256
E-Value4E-36
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.0378346701653
Replicate 21.3694145242595
Replicate 35.9779903167533
Condition 2: 8 Hour
Replicate 18.8242994415723
Replicate 26.6344102862638
Replicate 38.3793331964409
Condition 3: 24 Hour
Replicate 16.3274834938273
Replicate 27.8151074401198
Replicate 33.8267929442245


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_93384.p1 GENE.S_Transcript_93384~~S_Transcript_93384.p1 ORF type:complete len:145 (+),score=13.41,Chloroa_b-bind|PF00504.17|3.8e-18 S_Transcript_93384:981-1415(+)
ATGGCATCAACTATTATAGTGGGGAAAGTTTCCCTTGTACCTGAGCTAACTTGTACCTCTACTCGTTCATCTTTCCTCACCAACACCAACTTTCATACATCTTCTTCTTGTTTGTCTCCGGCTAACTCAACGCGATTAGTTGCGCTTCATGCTCAAGCTCGCCCTACTTGGCTTCCTGGTCTCGACCCTCCACCACACCTTGATGGAAGTTTGGCTGGGGATTTTGGATTTGACCCTCTTGGACTCGGGGAGGATCCGGAGAGCTTAAGATGGTATGTCCAAGCAGAGCTGGTTCACGCCCGCTTTGCTATGGCAGGAATTGCTGGCATTCTTTTCACTGACGTAAGTTTCACATTGTCAACTATTTCAACACTTGTTTACATAGTTATTCAATCATATTCATTCGCAATTGAGTCTGAGATACATACCCCGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_93384.p1 GENE.S_Transcript_93384~~S_Transcript_93384.p1 ORF type:complete len:145 (+),score=13.41,Chloroa_b-bind|PF00504.17|3.8e-18 S_Transcript_93384:981-1415(+)
MASTIIVGKVSLVPELTCTSTRSSFLTNTNFHTSSSCLSPANSTRLVALHAQARPTWLPGLDPPPHLDGSLAGDFGFDPLGLGEDPESLRWYVQAELVHARFAMAGIAGILFTDVSFTLSTISTLVYIVIQSYSFAIESEIHTP*

Click here to download the sequence:
Link to NCBI Protein BLAST