Transcript Information: S_Transcript_93385.p1


Annotated TAIR IDAT1G45474.1
Annotated Gene Namephotosystem I light harvesting complex gene 5
Annotated Gene Symbol(s)LHCA5
Annotation TypeOrtholog
Chromosome Positionchr1:17179353-17180439 | Forward length=256
E-Value1.8E-36
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 132.642509327526
Replicate 241.884827050595
Replicate 344.66600145247
Condition 2: 8 Hour
Replicate 145.649663647613
Replicate 253.307920586849
Replicate 341.965574972307
Condition 3: 24 Hour
Replicate 133.108651540432
Replicate 237.536937923325
Replicate 347.882474925338


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_93385.p1 GENE.S_Transcript_93385~~S_Transcript_93385.p1 ORF type:complete len:128 (+),score=19.40,Chloroa_b-bind|PF00504.17|1e-17 S_Transcript_93385:981-1364(+)
ATGGCATCAACTATTATAGTGGGGAAAGTTTCCCTTGTACCTGAGCTAACTTGTACCTCTACTCGTTCATCTTTCCTCACCAACACCAACTTTCATACATCTTCTTCTTGTTTGTCTCCGGCTAACTCAACGCGATTAGTTGCGCTTCATGCTCAAGCTCGCCCTACTTGGCTTCCTGGTCTCGACCCTCCACCACACCTTGATGGAAGTTTGGCTGGGGATTTTGGATTTGACCCTCTTGGACTCGGGGAGGATCCGGAGAGCTTAAGATGGTATGTCCAAGCAGAGCTGGTTCACGCCCGCTTTGCTATGGCAGGAATTGCTGGCATTCTTTTCACTGACGAGCAACAAAATTCAACTTTGCTAGCACAACAACCCTGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_93385.p1 GENE.S_Transcript_93385~~S_Transcript_93385.p1 ORF type:complete len:128 (+),score=19.40,Chloroa_b-bind|PF00504.17|1e-17 S_Transcript_93385:981-1364(+)
MASTIIVGKVSLVPELTCTSTRSSFLTNTNFHTSSSCLSPANSTRLVALHAQARPTWLPGLDPPPHLDGSLAGDFGFDPLGLGEDPESLRWYVQAELVHARFAMAGIAGILFTDEQQNSTLLAQQPC*

Click here to download the sequence:
Link to NCBI Protein BLAST