Transcript Information: S_Transcript_93498.p1


Annotated TAIR IDAT1G42970.1
Annotated Gene Nameglyceraldehyde-3-phosphate dehydrogenase B subunit
Annotated Gene Symbol(s)GAPB
Annotation TypeOrtholog
Chromosome Positionchr1:16127552-16129584 | Forward length=447
E-Value5.1E-265
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1560.35510591073
Replicate 2642.54535786389
Replicate 3655.00739194734
Condition 2: 8 Hour
Replicate 1107.09166953446
Replicate 2109.90915469735
Replicate 3116.33394794583
Condition 3: 24 Hour
Replicate 1772.76936512731
Replicate 2798.55638270946
Replicate 3734.92029629823


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_93498.p1 GENE.S_Transcript_93498~~S_Transcript_93498.p1 ORF type:5prime_partial len:413 (+),score=93.26,Gp_dh_C|PF02800.16|4.8e+03,Gp_dh_C|PF02800.16|2.8e+03,Gp_dh_C|PF02800.16|1.5e-65,Gp_dh_N|PF00044.20|2e-52,Gp_dh_N|PF00044.20|1.4e+03 S_Transcript_93498:3-1241(+)
GACTTCTCCGGCCTTCGATCCAGCAACTGTGTGACATTTTCCCGGGAGGCATCTTTTCATGATGTAGTGGCTGCTCAACTAACCACCAAGGCTACAGGAGCAGCTCCTGTCAAGGGTGAAACAGTGGCCAAGCTTAAGGTGGCAATCAATGGATTTGGACGCATCGGCAGGAACTTCCTTAGGTGCTGGCACGGCCGTGAGAACTCACCTCTTGAGGTTGTTGTTGTCAATGACAGTGGAGGCGTCAAGAATGCATCGCACCTGCTTAAATATGACTCCACTCTGGGTACCTTCAAGGCTGATGTGAAAATCGTAGACAACGAGACCATCAGTGTTGATGGCAAGCTTATTAAGGTTGTTTCTAACAGGGACCCCCTTCAACTCCCTTGGGCTGACCTTGGGATCGATATTGTCATCGAGGGAACTGGAGTGTTTGTAGATGGTCCTGGTGCTGGAAAACACATCCAAGCTGGTGCTAAGAAAGTTATCATCACTGCTCCAGCAAAGGGTGCTGATATCCCTACCTATGTTGTTGGGGTGAATGCACAAGATTACTCACACGATGTTTCTAACATCATAAGCAATGCTTCTTGCACGACCAACTGTTTGGCTCCTTTCGTAAAGGTCATAGACGAAGAATTCGGGATTGTGAAGGGGACAATGACCACCACTCATTCCTACACTGGTGACCAGAGGCTCTTGGATGCTTCCCACAGGGACTTGAGGAGAGCCAGGGCTGCAGCACTTAACATCGTCCCAACCAGCACTGGTGCAGCTAAGGCTGTGTCATTGGTCCTACCACAGCTCAAGGGCAAGCTCAATGGAATTGCCCTCCGAGTCCCAACCCCTAACGTCTCAGTTGTTGACCTTGTTGTCAATGTCGCAAAGAAAGGAATCTCAGCTGAGGATGTCAACAATGCCTTCAGGAAAGCAGCTGAAGGTCCACTGAAAGGCATATTGGAGGTTTGCGACATCCCTCTTGTGTCGGTAGATTTCAAGTGCTCTGATGTGTCATCTACCATCGACTCTTCTCTCAGCATGGTCATGGGTGATGATATGGTTAAGGTCGTGGCCTGGTACGACAATGAGTGGGGATACAGTCAGCGTGTGGTTGATTTGGCGCATTTGGTGGCAAGCAAGTGGCCTGGAATGGAGGGAGTAGCCGGAAGTGGAGACGCATTGGAGGATTTCTGCAAGACCAACCCCGCTGAGGTCGAGTGCAAGGTTTACGAAGCTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_93498.p1 GENE.S_Transcript_93498~~S_Transcript_93498.p1 ORF type:5prime_partial len:413 (+),score=93.26,Gp_dh_C|PF02800.16|4.8e+03,Gp_dh_C|PF02800.16|2.8e+03,Gp_dh_C|PF02800.16|1.5e-65,Gp_dh_N|PF00044.20|2e-52,Gp_dh_N|PF00044.20|1.4e+03 S_Transcript_93498:3-1241(+)
DFSGLRSSNCVTFSREASFHDVVAAQLTTKATGAAPVKGETVAKLKVAINGFGRIGRNFLRCWHGRENSPLEVVVVNDSGGVKNASHLLKYDSTLGTFKADVKIVDNETISVDGKLIKVVSNRDPLQLPWADLGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNAQDYSHDVSNIISNASCTTNCLAPFVKVIDEEFGIVKGTMTTTHSYTGDQRLLDASHRDLRRARAAALNIVPTSTGAAKAVSLVLPQLKGKLNGIALRVPTPNVSVVDLVVNVAKKGISAEDVNNAFRKAAEGPLKGILEVCDIPLVSVDFKCSDVSSTIDSSLSMVMGDDMVKVVAWYDNEWGYSQRVVDLAHLVASKWPGMEGVAGSGDALEDFCKTNPAEVECKVYEA*

Click here to download the sequence:
Link to NCBI Protein BLAST