Transcript Information: S_Transcript_93499.p1


Annotated TAIR IDAT1G42970.1
Annotated Gene Nameglyceraldehyde-3-phosphate dehydrogenase B subunit
Annotated Gene Symbol(s)GAPB
Annotation TypeOrtholog
Chromosome Positionchr1:16127552-16129584 | Forward length=447
E-Value3.2E-180
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1335.45799876278
Replicate 2404.731677345
Replicate 3407.18668294381
Condition 2: 8 Hour
Replicate 1113.73541502471
Replicate 2114.74189036229
Replicate 3137.56782319853
Condition 3: 24 Hour
Replicate 1437.20362056105
Replicate 2497.71507775508
Replicate 3467.06704639278


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_93499.p1 GENE.S_Transcript_93499~~S_Transcript_93499.p1 ORF type:5prime_partial len:357 (+),score=85.39,Gp_dh_C|PF02800.16|3.7e+03,Gp_dh_C|PF02800.16|1.1e-65,Gp_dh_N|PF00044.20|3.1e-07,Gp_dh_N|PF00044.20|2.4e-16,Gp_dh_N|PF00044.20|1.1e+03 S_Transcript_93499:3-1073(+)
GACTTCTCCGGCCTTCGATCCAGCAACTGTGTGACATTTTCCCGGGAGGCATCTTTTCATGATGTAGTGGCTGCTCAACTAACCACCAAGGCTACAGGAGCAGCTCCTGTCAAGGGTGAAACAGTGGCCAAGCTTAAGGTGGCAATCAATGGATTTGGACGCATCGGCAGGAACTTCCTTAGGTGCTGGCACGGCCGTGAGAACTCACCTCTTGAGGTTGTTGTTGTCAATGACAGTGGAGGCGTCAAGAATGGAACTGGAGTGTTTGTAGATGGTCCTGGTGCTGGAAAACACATCCAAGCTGGTGCTAAGAAAGTTATCATCACTGCTCCAGCAAAGGGTGCTGATATCCCTACCTATGTTGTTGGGGTGAATGCACAAGATTACTCACACGATGTTTCTAACATCATAAGCAATGCTTCTTGCACGACCAACTGTTTGGCTCCTTTCGTAAAGGTCATAGACGAAGAATTCGGGATTGTGAAGGGGACAATGACCACCACTCATTCCTACACTGGTGACCAGAGGCTCTTGGATGCTTCCCACAGGGACTTGAGGAGAGCCAGGGCTGCAGCACTTAACATCGTCCCAACCAGCACTGGTGCAGCTAAGGCTGTGTCATTGGTCCTACCACAGCTCAAGGGCAAGCTCAATGGAATTGCCCTCCGAGTCCCAACCCCTAACGTCTCAGTTGTTGACCTTGTTGTCAATGTCGCAAAGAAAGGAATCTCAGCTGAGGATGTCAACAATGCCTTCAGGAAAGCAGCTGAAGGTCCACTGAAAGGCATATTGGAGGTTTGCGACATCCCTCTTGTGTCGGTAGATTTCAAGTGCTCTGATGTGTCATCTACCATCGACTCTTCTCTCAGCATGGTCATGGGTGATGATATGGTTAAGGTCGTGGCCTGGTACGACAATGAGTGGGGATACAGTCAGCGTGTGGTTGATTTGGCGCATTTGGTGGCAAGCAAGTGGCCTGGAATGGAGGGAGTAGCCGGAAGTGGAGACGCATTGGAGGATTTCTGCAAGACCAACCCCGCTGAGGTCGAGTGCAAGGTTTACGAAGCTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_93499.p1 GENE.S_Transcript_93499~~S_Transcript_93499.p1 ORF type:5prime_partial len:357 (+),score=85.39,Gp_dh_C|PF02800.16|3.7e+03,Gp_dh_C|PF02800.16|1.1e-65,Gp_dh_N|PF00044.20|3.1e-07,Gp_dh_N|PF00044.20|2.4e-16,Gp_dh_N|PF00044.20|1.1e+03 S_Transcript_93499:3-1073(+)
DFSGLRSSNCVTFSREASFHDVVAAQLTTKATGAAPVKGETVAKLKVAINGFGRIGRNFLRCWHGRENSPLEVVVVNDSGGVKNGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNAQDYSHDVSNIISNASCTTNCLAPFVKVIDEEFGIVKGTMTTTHSYTGDQRLLDASHRDLRRARAAALNIVPTSTGAAKAVSLVLPQLKGKLNGIALRVPTPNVSVVDLVVNVAKKGISAEDVNNAFRKAAEGPLKGILEVCDIPLVSVDFKCSDVSSTIDSSLSMVMGDDMVKVVAWYDNEWGYSQRVVDLAHLVASKWPGMEGVAGSGDALEDFCKTNPAEVECKVYEA*

Click here to download the sequence:
Link to NCBI Protein BLAST