Transcript Information: S_Transcript_935.p1


Annotated TAIR IDAT3G14810.1
Annotated Gene Namemechanosensitive channel of small conductance-like 5
Annotated Gene Symbol(s)MSL5
Annotation TypeHomolog
Chromosome Positionchr3:4971223-4974216 | Reverse length=881
E-Value1E-27
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.5578342186447
Replicate 22.4484315240657
Replicate 32.2041318734059
Condition 2: 8 Hour
Replicate 13.4068611360298
Replicate 23.546756491664
Replicate 32.9634227158145
Condition 3: 24 Hour
Replicate 11.3586451927077
Replicate 20.41458191907953
Replicate 32.2453771238701


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_935.p1 GENE.S_Transcript_935~~S_Transcript_935.p1 ORF type:complete len:820 (+),score=109.96,MS_channel|PF00924.14|1.6e+04,MS_channel|PF00924.14|5.5e-07 S_Transcript_935:153-2612(+)
ATGGCCCTCAACCAATCTACAAATGCATCAACCCACAATATCGATCAACCGTTAATAACCCAAACCCAATCAACTTCTAACCGTGTTGAAAATATTGTTCTGAATGTCTTTGGGGAAAATAGTTCATCTACAGAACAATCTGTGTTACAAAAACTTGGTCTATATTTCATGAGAACAATCTTGATCCTAGCTGTTCTATCTGTGATGATACTCATTGCCATTGTAGCAATGCCATTACTATTCATATCTCTTTTGGTCACCCGTTTTCTGCAACTCATTAGCAACGACGATGACAACAACAATGCTATCTTGCTCAAGCTTCATGTTCTCACCTCCATATATGTGGATTTAGCACTTGCTATCATAGGAGGATTAATACTTCTTTTTTGGCTACCAATATTAACAAATTGGGTTTTCATAACACCTTTAATATTTGGCCTCTATGTTATTTGCTACTTTCTTGTTCTACTTGCTCAAGAGCTACTAATTGGAATCAAGGTGGTGAGTTCTAAGACGAATATGGAGATTTCAGATGCAATTGGTGAAGCACTCTTTTGTCTCATTTTTTGGTTACTTTTATCAAAAACTAAGGTAATGAAACTTCTCCCAACTTTTCAACAATCCCAAATACTTGGATTACACACTTGGAAATGGGTCGGGGTACCAATTTTGGTTCTCCTAGGGTATAATTGCATTAGAATTGCTACATATTTGATTACATGGTTGATAGATGTTGGATGTCAACAACTTGACCAAGGATCAACTTTTGCTGATATTATTAAGCTTCTTTTGCTACGTGACAAACTTCCTCGTAGCAATAAATATTTTGTGTATTGGGCTAATGGAGTTAGAAGAAGCATCAACTTTATATTGAGCTCCTTGTTGATTTTACTTACATGGGTATTTTATTTTGGGACACATTTAGACAAAACACAAGAGGCTGAAAATGTGTTCAAATTGGGTAGACAAACTTGCCTTTGTCTTCTAATTTGCTCCTTCTTTTGGCTAATCAAGACTTGTATCGTACTTACATGGGAAGGTCGTGCTGTATATGATATACTAGCTTCTACGATTATTGATCGTAGAAAACAGTTGTACTTCCTTGCCATTCTTGGACATAATAAGCATGATATTTTTGGTGATCAAAGTAATAGTCGTACTCCACCTCGTTTCTTCAAAAACAATCTTTTGTTGGTGAGGAAATTAAGGAAAAAAAGAGAGAATAATTATAATGAGAATGAGAATTTTAATGGTGGTAGAAAATCAGAAATGTTGGATGAAGAAATTAAGGAAGAAAGATGGGAAATGGAGAGAAAATGGGAAAGGGTAGAAGAGGAATTGTTGATGCACAAGGAGCTAATTGGTCAGCAAGCTGATGAGAACTTGAATCCAACCATTGATGATATAAAACAAGTGGCTCAATACTTTTTGCGAGCTAAAGATGTTTTGTCAAAGAAGACGTATGTGAATGACCTTCTCAATGATTTTAATAAGAGCGATGATGAGCAAAGCATTGAGGACAAAGTGTACAAAATTATCATTGCCAAAAAGGAGTTGAATAGTGGAAATCAATTTTCTAATGTAGCTCGTAGAGAAGATCGGCAAAATAATGACTGGGAGAAATTTAAAGATTTGCTGCAAGAGAATGTAAATTCTGACAGTCATGCTAATCATCCAAATGGAATATCTTATGAAGAACTTAGAGCATGGGTGGAAAGGGCCCACAGTGGTTGTTTGATCCTGGCAAATACACTAAGTAGTGCCAAGGATGGCGTCAAAATTTTGAACAATCTTATTAGTGGAATTTTGATAGGCGCAACTTTTATAATGTGGCTTCTTCTCACTCAATTGGCTACCACAAATGTGCTTGTCCTCATTTCATCACCATTATTGGCTGGAACATTCATATTTGGAGACACTTGTAAGAATTTTTTTCAAGGGATCATTTTCATCTACGTATTGCATCGTTTTGATGTTGGTGACCTATGTGTCACTGATGGAGAAATGATGAAGGTAAAATCTGTTGGCATTTGGGAAACAGCCTTCTCAAAGATTGAAAGCTTTGATGCTCAAGCAAAAGTGACTTATGCAAATTCAGTGTTAGCCAACAAGAAGGTCATCAATCACAAAAATGAATTCGACTGGGATGACTACGTGGAGTTCGATTTGAATCCCATGACCAAGGAAGAATTCAACGCATTGAAGGAAAAGATTGAAAATTATGTTCGGGAGGAAGCAAAAGATAAATTGATTCCATCTTCTTGTACCATGGAGGTGTTGGCGAAAGATAATAGCACGATGAAGATAGTCATTCGCTTTAAACACACGTCAATTCGACAGGGTAGGACGCACTTTCAATGTCTTCAACGAAAACGTCAAGTACGAGCTGATATTTATCTCGATATTCAAGCTTTTATTAAGAGCAATACCAAGGAAAGTTCAGTATCATTGTTCACTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_935.p1 GENE.S_Transcript_935~~S_Transcript_935.p1 ORF type:complete len:820 (+),score=109.96,MS_channel|PF00924.14|1.6e+04,MS_channel|PF00924.14|5.5e-07 S_Transcript_935:153-2612(+)
MALNQSTNASTHNIDQPLITQTQSTSNRVENIVLNVFGENSSSTEQSVLQKLGLYFMRTILILAVLSVMILIAIVAMPLLFISLLVTRFLQLISNDDDNNNAILLKLHVLTSIYVDLALAIIGGLILLFWLPILTNWVFITPLIFGLYVICYFLVLLAQELLIGIKVVSSKTNMEISDAIGEALFCLIFWLLLSKTKVMKLLPTFQQSQILGLHTWKWVGVPILVLLGYNCIRIATYLITWLIDVGCQQLDQGSTFADIIKLLLLRDKLPRSNKYFVYWANGVRRSINFILSSLLILLTWVFYFGTHLDKTQEAENVFKLGRQTCLCLLICSFFWLIKTCIVLTWEGRAVYDILASTIIDRRKQLYFLAILGHNKHDIFGDQSNSRTPPRFFKNNLLLVRKLRKKRENNYNENENFNGGRKSEMLDEEIKEERWEMERKWERVEEELLMHKELIGQQADENLNPTIDDIKQVAQYFLRAKDVLSKKTYVNDLLNDFNKSDDEQSIEDKVYKIIIAKKELNSGNQFSNVARREDRQNNDWEKFKDLLQENVNSDSHANHPNGISYEELRAWVERAHSGCLILANTLSSAKDGVKILNNLISGILIGATFIMWLLLTQLATTNVLVLISSPLLAGTFIFGDTCKNFFQGIIFIYVLHRFDVGDLCVTDGEMMKVKSVGIWETAFSKIESFDAQAKVTYANSVLANKKVINHKNEFDWDDYVEFDLNPMTKEEFNALKEKIENYVREEAKDKLIPSSCTMEVLAKDNSTMKIVIRFKHTSIRQGRTHFQCLQRKRQVRADIYLDIQAFIKSNTKESSVSLFT*

Click here to download the sequence:
Link to NCBI Protein BLAST