Transcript Information: S_Transcript_936.p1


Annotated TAIR IDAT3G14810.1
Annotated Gene Namemechanosensitive channel of small conductance-like 5
Annotated Gene Symbol(s)MSL5
Annotation TypeHomolog
Chromosome Positionchr3:4971223-4974216 | Reverse length=881
E-Value0.0002
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.5849848381063
Replicate 21.1000836898484
Replicate 31.9668845961735
Condition 2: 8 Hour
Replicate 11.6245103427179
Replicate 21.7971845167647
Replicate 32.4799601091668
Condition 3: 24 Hour
Replicate 11.8153642789967
Replicate 22.1659321312576
Replicate 30.80347232869483


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_936.p1 GENE.S_Transcript_936~~S_Transcript_936.p1 ORF type:complete len:722 (+),score=98.50 S_Transcript_936:153-2318(+)
ATGGCCCTCAACCAATCTACAAATGCATCAACCCACAATATCGATCAACCGTTAATAACCCAAACCCAATCAACTTCTAACCGTGTTGAAAATATTGTTCTGAATGTCTTTGGGGAAAATAGTTCATCTACAGAACAATCTGTGTTACAAAAACTTGGTCTATATTTCATGAGAACAATCTTGATCCTAGCTGTTCTATCTGTGATGATACTCATTGCCATTGTAGCAATGCCATTACTATTCATATCTCTTTTGGTCACCCGTTTTCTGCAACTCATTAGCAACGACGATGACAACAACAATGCTATCTTGCTCAAGCTTCATGTTCTCACCTCCATATATGTGGATTTAGCACTTGCTATCATAGGAGGATTAATACTTCTTTTTTGGCTACCAATATTAACAAATTGGGTTTTCATAACACCTTTAATATTTGGCCTCTATGTTATTTGCTACTTTCTTGTTCTACTTGCTCAAGAGCTACTAATTGGAATCAAGGTGGTGAGTTCTAAGACGAATATGGAGATTTCAGATGCAATTGGTGAAGCACTCTTTTGTCTCATTTTTTGGTTACTTTTATCAAAAACTAAGGTAATGAAACTTCTCCCAACTTTTCAACAATCCCAAATACTTGGATTACACACTTGGAAATGGGTCGGGGTACCAATTTTGGTTCTCCTAGGGTATAATTGCATTAGAATTGCTACATATTTGATTACATGGTTGATAGATGTTGGATGTCAACAACTTGACCAAGGATCAACTTTTGCTGATATTATTAAGCTTCTTTTGCTACGTGACAAACTTCCTCGTAGCAATAAATATTTTGTGTATTGGGCTAATGGAGTTAGAAGAAGCATCAACTTTATATTGAGCTCCTTGTTGATTTTACTTACATGGGTATTTTATTTTGGGACACATTTAGACAAAACACAAGAGGCTGAAAATGTGTTCAAATTGGGTAGACAAACTTGCCTTTGTCTTCTAATTTGCTCCTTCTTTTGGCTAATCAAGACTTGTATCGTACTTACATGGGAAGGTCGTGCTGTATATGATATACTAGCTTCTACGATTATTGATCGTAGAAAACAGTTGTACTTCCTTGCCATTCTTGGACATAATAAGCATGATATTTTTGGTGATCAAAGTAATAGTCGTACTCCACCTCGTTTCTTCAAAAACAATCTTTTGTTGGTGAGGAAATTAAGGAAAAAAAGAGAGAATAATTATAATGAGAATGAGAATTTTAATGGTGGTAGAAAATCAGAAATGTTGGATGAAGAAATTAAGGAAGAAAGATGGGAAATGGAGAGAAAATGGGAAAGGGTAGAAGAGGAATTGTTGATGCACAAGGAGCTAATTGGTCAGCAAGCTGATGAGAACTTGAATCCAACCATTGATGATATAAAACAAGTGGCTCAATACTTTTTGCGAGCTAAAGATGTTTTGTCAAAGAAGACGTATGTGAATGACCTTCTCAATGATTTTAATAAGAGCGATGATGAGCAAAGCATTGAGGACAAAGTGTACAAAATTATCATTGCCAAAAAGGAGTTGAATAGTGGAAATCAATTTTCTAATGTAGCTCGTAGAGAAGATCGGCAAAATAATGACTGGGAGAAATTTAAAGATTTGCTGCAAGAGAATGTAAATTCTGACAGTCATGCTAATCATCCAAATGGAATATCTTATGAAGAACTTAGAGCATGGGTGATGAAGGTAAAATCTGTTGGCATTTGGGAAACAGCCTTCTCAAAGATTGAAAGCTTTGATGCTCAAGCAAAAGTGACTTATGCAAATTCAGTGTTAGCCAACAAGAAGGTCATCAATCACAAAAATGAATTCGACTGGGATGACTACGTGGAGTTCGATTTGAATCCCATGACCAAGGAAGAATTCAACGCATTGAAGGAAAAGATTGAAAATTATGTTCGGGAGGAAGCAAAAGATAAATTGATTCCATCTTCTTGTACCATGGAGGTGTTGGCGAAAGATAATAGCACGATGAAGATAGTCATTCGCTTTAAACACACGTCAATTCGACAGGGTAGGACGCACTTTCAATGTCTTCAACGAAAACGTCAAGTACGAGCTGATATTTATCTCGATATTCAAGCTTTTATTAAGAGCAATACCAAGGAAAGTTCAGTATCATTGTTCACTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_936.p1 GENE.S_Transcript_936~~S_Transcript_936.p1 ORF type:complete len:722 (+),score=98.50 S_Transcript_936:153-2318(+)
MALNQSTNASTHNIDQPLITQTQSTSNRVENIVLNVFGENSSSTEQSVLQKLGLYFMRTILILAVLSVMILIAIVAMPLLFISLLVTRFLQLISNDDDNNNAILLKLHVLTSIYVDLALAIIGGLILLFWLPILTNWVFITPLIFGLYVICYFLVLLAQELLIGIKVVSSKTNMEISDAIGEALFCLIFWLLLSKTKVMKLLPTFQQSQILGLHTWKWVGVPILVLLGYNCIRIATYLITWLIDVGCQQLDQGSTFADIIKLLLLRDKLPRSNKYFVYWANGVRRSINFILSSLLILLTWVFYFGTHLDKTQEAENVFKLGRQTCLCLLICSFFWLIKTCIVLTWEGRAVYDILASTIIDRRKQLYFLAILGHNKHDIFGDQSNSRTPPRFFKNNLLLVRKLRKKRENNYNENENFNGGRKSEMLDEEIKEERWEMERKWERVEEELLMHKELIGQQADENLNPTIDDIKQVAQYFLRAKDVLSKKTYVNDLLNDFNKSDDEQSIEDKVYKIIIAKKELNSGNQFSNVARREDRQNNDWEKFKDLLQENVNSDSHANHPNGISYEELRAWVMKVKSVGIWETAFSKIESFDAQAKVTYANSVLANKKVINHKNEFDWDDYVEFDLNPMTKEEFNALKEKIENYVREEAKDKLIPSSCTMEVLAKDNSTMKIVIRFKHTSIRQGRTHFQCLQRKRQVRADIYLDIQAFIKSNTKESSVSLFT*

Click here to download the sequence:
Link to NCBI Protein BLAST