Transcript Information: S_Transcript_93652.p1


Annotated TAIR IDAT5G60940.1
Annotated Gene NameTransducin/WD40 repeat-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:24523092-24525655 | Forward length=429
E-Value2.3E-217
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.4677731202847
Replicate 210.27925422566
Replicate 38.5507230933057
Condition 2: 8 Hour
Replicate 110.178027196814
Replicate 211.236769430408
Replicate 312.401947697444
Condition 3: 24 Hour
Replicate 110.128082345639
Replicate 27.674790738354
Replicate 310.31810907482


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_93652.p1 GENE.S_Transcript_93652~~S_Transcript_93652.p1 ORF type:complete len:440 (+),score=80.25,WD40|PF00400.28|0.00019,WD40|PF00400.28|0.00058,WD40|PF00400.28|2.4,WD40|PF00400.28|0.051,WD40|PF00400.28|0.037,WD40|PF00400.28|0.16,Ge1_WD40|PF16529.1|0.013,Ge1_WD40|PF16529.1|1.6e+02,Ge1_WD40|PF16529.1|2 S_Transcript_93652:294-1613(+)
ATGATGGGGATGGAAAGGAATGTGGAGCAAATTTTACAAGAAGGAAAGCTCTATCGTGATGTCAATGCAATGGTTGTTGCTCATCTTCGTGACAATAATCTCAATCAAGCAGCTAGTGCAGTTGCTTCAGCTACTATGACTCCATTGGATGTTGAAGTGCCTCCCAATCGACTTCTTGATCTCGTTTCTAAGGGTCTTGCAGTGGAGAAGGGTGAGCCAGTAAAAGGAGTTCCTGCCTCCACTTTGCTTGATTCTGGCTCTTCTGCACCTGCAGCTTATGGGTCAATTCCAGTTCCTCGAACTGCTAATGTTGATTTCAGTGTTCTGCCAGATGTAAAAGGCTCATCTAAGAGTTTCCCAGAGCATGAGACACGACATGTATCGGAGCATAAAAATGTTGCAAGATGTGCACGGTTTAGTCCTGATGGAAGGTATGTTGCAACAGGAAGTGCAGACACATCCATTAAACTCTTTGAGGTTGCAAAGATCAAGCAAATGATGCTACCGGAGGTCAGAGATGGCCCCATTAGACCAGTGATACGGACTTTTTACGACCACATGCAACCTATAAATGATTTGGATTTCCATCCACAGAATACCATACTGATTTCAGGAGCAAAAGACCATACAATAAAGTTCTTTGATTTTTCCAAAACAACAGCGAAAAGAGCTTTTAGGGTCATTCAGGATACACACAATGTACGCTCAGTGTCATTTCATCCTTCAGGAGACTATCTTTTGGCTGGGACTGATCATCCAATTCCACACTTATACGATATCAACACCTTCAAGTGTTACTTGTCAGCTAATGTTGAAGATATTGCTGCAAATGCGGCTATAAATCAAGTTAGATACTCTCCCACGGGCGGCATGTATGTCACAGCTTCCAAAGATGGAGCTGTTCGCTTATGGGATGGTGTCAGTGCCAAGTGTGTACGCCCCATAATTGGTGCACATGGAACTGAGGCTACTAGTGCAAATTTTACGAAGGATCACAGGTTTGTCCTCTCTTGCGGGAAGGATTCCACGGTAAAACTCTGGGAAGTTGGCACTGGAAGACTGATAAAGCAGTATGTAGGAGCAACCCACACGCAGTTGAGGTGCCAGGCTGTTTTCAGTGACACTGAAGAGTTCATACTTTCCATAGATGAACCAAGAAACGAGATTGTTGTCTGGGACGCTCTAACTGCAGCAGAGATAGCCAGACTACGTTCGAATCATATTGGACCACCCCGCTGGATAGAGCATTCTCCTATAGAATCAGCATTTGTCACCTGTGGGACGGACCGATCTGTACGTTTCTGGAAGGAAAACCTTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_93652.p1 GENE.S_Transcript_93652~~S_Transcript_93652.p1 ORF type:complete len:440 (+),score=80.25,WD40|PF00400.28|0.00019,WD40|PF00400.28|0.00058,WD40|PF00400.28|2.4,WD40|PF00400.28|0.051,WD40|PF00400.28|0.037,WD40|PF00400.28|0.16,Ge1_WD40|PF16529.1|0.013,Ge1_WD40|PF16529.1|1.6e+02,Ge1_WD40|PF16529.1|2 S_Transcript_93652:294-1613(+)
MMGMERNVEQILQEGKLYRDVNAMVVAHLRDNNLNQAASAVASATMTPLDVEVPPNRLLDLVSKGLAVEKGEPVKGVPASTLLDSGSSAPAAYGSIPVPRTANVDFSVLPDVKGSSKSFPEHETRHVSEHKNVARCARFSPDGRYVATGSADTSIKLFEVAKIKQMMLPEVRDGPIRPVIRTFYDHMQPINDLDFHPQNTILISGAKDHTIKFFDFSKTTAKRAFRVIQDTHNVRSVSFHPSGDYLLAGTDHPIPHLYDINTFKCYLSANVEDIAANAAINQVRYSPTGGMYVTASKDGAVRLWDGVSAKCVRPIIGAHGTEATSANFTKDHRFVLSCGKDSTVKLWEVGTGRLIKQYVGATHTQLRCQAVFSDTEEFILSIDEPRNEIVVWDALTAAEIARLRSNHIGPPRWIEHSPIESAFVTCGTDRSVRFWKENL*

Click here to download the sequence:
Link to NCBI Protein BLAST