Transcript Information: S_Transcript_93765.p1


Annotated TAIR IDAT5G59710.1
Annotated Gene NameVIRE2 interacting protein 2
Annotated Gene Symbol(s)VIP2, AtVIP2
Annotation TypeOrtholog
Chromosome Positionchr5:24058157-24061736 | Forward length=614
E-Value2E-131
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.4511974821877
Replicate 23.2658734542374
Replicate 34.2466826508291
Condition 2: 8 Hour
Replicate 15.4716461997907
Replicate 23.1644391168034
Replicate 36.450848617297
Condition 3: 24 Hour
Replicate 14.2396319932403
Replicate 24.9949847882081
Replicate 31.9082467806502


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_93765.p1 GENE.S_Transcript_93765~~S_Transcript_93765.p1 ORF type:3prime_partial len:304 (+),score=59.79 S_Transcript_93765:475-1383(+)
ATGCATGGTGGATTTAATGTTCCAAATATGTCGGGTACACTTACTTCCAGAAATTCATCTATGAATAGTGTTGCCTCTGTTGGGGTTCAACAACCCACTGGAAATGTTCCAGGGGGGCGTTTTACATCAAATAATATTCCCGTTGCTCTGTCTCAGATATCTCATGGAAGCTCACATGGTGGATATTCAGGAGTTACAAATAGAGGAGGTATGAATGTTGTAGGAAGTCCTGGGTATAATAGTAACACAAATGGTGTTGGTGGTTCTATTCCTGGGATTCTTCCAACTTCTGCTGCAATTGGTAATCGTAATGCTGTTCCAGGCCTAGGTGTCTCCCCTGTTTTGGGAAATGCAGGTCCTCGAGTTTCAGGTTCGATGGGAAGTATGGTTGGCAGTGGAAGCATTGGGAGGAATATAAGCTCTGGAGGTCTCTCTATGCCTGCTCTTGCTTCTCGTCTGAATATGTCCACAAACAGCGGATCTGGGAGCTTAGGAGTGCAGGGACCTAACAGATTAACAAGTGGCGTACTTCAACAAGCTTCACCGCAGGTACTTAACATGTTTGGAAACTCCTACCCTTCTGCTGGGGGGCCACTCTCGCAGAGCCATGTCCAAGCAGTAAATAATTTAAGTTCCATGGGGATGTTAAGTGATGATAACTCCAATGACAGTTCCCCTTTTACGCTAAATGACTTTCCTCAGCTCGGCAGTCGACCTAACTCTGCTGGGGGTCCTCAAGGACAATTAGGTTCATTGAGAAAAGGCCTTGGAGTCAGTCCTATTGTTCAGCAAAACCAGGAATTCAGCATCCAAAATGAGGATTTTCCTGCCTTGCCAGGTTTCAAAGGTTTGTTTCCCCCCTCCTGGCGCAGGGATTCCCTGTGGGCCCTGGCCTGCTCTGCAGTCTGG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_93765.p1 GENE.S_Transcript_93765~~S_Transcript_93765.p1 ORF type:3prime_partial len:304 (+),score=59.79 S_Transcript_93765:475-1383(+)
MHGGFNVPNMSGTLTSRNSSMNSVASVGVQQPTGNVPGGRFTSNNIPVALSQISHGSSHGGYSGVTNRGGMNVVGSPGYNSNTNGVGGSIPGILPTSAAIGNRNAVPGLGVSPVLGNAGPRVSGSMGSMVGSGSIGRNISSGGLSMPALASRLNMSTNSGSGSLGVQGPNRLTSGVLQQASPQVLNMFGNSYPSAGGPLSQSHVQAVNNLSSMGMLSDDNSNDSSPFTLNDFPQLGSRPNSAGGPQGQLGSLRKGLGVSPIVQQNQEFSIQNEDFPALPGFKGLFPPSWRRDSLWALACSAVW

Click here to download the sequence:
Link to NCBI Protein BLAST