Transcript Information: S_Transcript_93821.p1


Annotated TAIR IDAT1G27060.1
Annotated Gene NameRegulator of chromosome condensation (RCC1) family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:9395023-9396673 | Forward length=386
E-Value3.6E-148
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.8215940201957
Replicate 26.7885506330815
Replicate 36.1180230277329
Condition 2: 8 Hour
Replicate 16.8179733465834
Replicate 24.7862849253261
Replicate 34.6116016453085
Condition 3: 24 Hour
Replicate 16.8265260908107
Replicate 26.3741970058477
Replicate 36.305511101279


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_93821.p1 GENE.S_Transcript_93821~~S_Transcript_93821.p1 ORF type:complete len:416 (+),score=87.65,RCC1|PF00415.14|5.5e-10,RCC1|PF00415.14|9.7e-12,RCC1|PF00415.14|3.2e-12,RCC1|PF00415.14|3e-06,RCC1|PF00415.14|0.51,RCC1|PF00415.14|0.0013,RCC1|PF00415.14|1.9e-10,RCC1_2|PF13540.2|14,RCC1_2|PF13540.2|0.00061,RCC1_2|PF13540.2|0.0003,RCC1_2|PF13540.2|0.00014,RCC1_2|PF13540.2|8.1e-05,RCC1_2|PF13540.2|0.067,RCC1_2|PF13540.2|2.5e-08,RCC1_2|PF13540.2|1.2e+03 S_Transcript_93821:213-1460(+)
ATGGAGGAAACAGAAAGAGAGACAACAGAACAGCAAGAAGACAAAAAAGTAAAACAGATTGAAACACAGAATCATAAGGATGAACAAGTGCAAGAGATATGGAGCTGGGGAGCAGGAACAGATGGGCAGCTTGGAACTGGGAAGCTTGAAGATGAATACACCCCACAACTTCTCACCAACCTCTCAAAATCTCTCTTTTCCTTTGGCTCAATTTCTCTGCTTTCCTGTGGTGGTGCCCATGTCATTGCTCTTAGTACATGTGGGAAAGTGATGAGTTGGGGAAGAGGAGCATCTGGGCAGTTGGGGCATGGTGATATTGTGGCTAATTGCTTGTACCCAAAGCTAGTGGATTCTTTGTCAACCTTCAATATTTCTCATATTTCTGCTGGTTGGAATCACTCTGGATTTGTTTCAGATTCTGGATGTCTTTTCACATGTGGGGATGGCTCGTTTGGTCAGCTTGGGCATGGCGATTATCAGTCTTACAGTTCCCCCAAAGGGGTTTCGTTTTTCAGTACTAAGCATGTAGAGCAGATTGCTTGTGGTATGCGGCATTCATTGGTACTGTTAAAAGGCAACGCAGCAGACAAAGTCTATGGTTTCGGATCAGGCAAGCGTGGTCAATTGGGCGTTTCAAAGGATAAAATAAGATCACTGAATCTTCCCCAAACATGCCCGGGATTTGAAGCAGCAGAATTAGTGAGCGTCATTGCAAATGGAGACCACAGTGCTGCGTTATCTGCTGATGGCCAGCTTTACACTTGGGGAAGAGGCTTCAGCAGCAACTCAGATGTTTCTGTTCCTCAATCTTTGCTTTCAACTTTGACTTTCAAGCAAGCTGTTCTTGGGTGGAATCATGCTTTGTTATTAACTAGTGAAGGAGAAGTATTAATGCTTGGCGGCCGCAACCATGGAGTTCTTGGAGAACCTCAGAGGATAACTCACTCTAATAATTCATCTGATTCAGGTGAACACAATCTGTCCAAAGTACCTGGTCTTGACGGCAAACAAGCTATACAAATTGCAGCTGGATCTGAGCACTCAGCAATAGTAACAGATGATGGACATTTATGGACATGGGGTTGGGGTGAACATGGTCAGCTGGGTTTGGGCAGTACTAGCAACCAAACCTTACCGCATATGGTGGATCTAAAGCACCGATCCTGTGATCACTACTTGACATCAAGAGTATATTGTGGAAGTGGCTTCACATTTGCTCTGAACACCAGGCCTACACTATCGGATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_93821.p1 GENE.S_Transcript_93821~~S_Transcript_93821.p1 ORF type:complete len:416 (+),score=87.65,RCC1|PF00415.14|5.5e-10,RCC1|PF00415.14|9.7e-12,RCC1|PF00415.14|3.2e-12,RCC1|PF00415.14|3e-06,RCC1|PF00415.14|0.51,RCC1|PF00415.14|0.0013,RCC1|PF00415.14|1.9e-10,RCC1_2|PF13540.2|14,RCC1_2|PF13540.2|0.00061,RCC1_2|PF13540.2|0.0003,RCC1_2|PF13540.2|0.00014,RCC1_2|PF13540.2|8.1e-05,RCC1_2|PF13540.2|0.067,RCC1_2|PF13540.2|2.5e-08,RCC1_2|PF13540.2|1.2e+03 S_Transcript_93821:213-1460(+)
MEETERETTEQQEDKKVKQIETQNHKDEQVQEIWSWGAGTDGQLGTGKLEDEYTPQLLTNLSKSLFSFGSISLLSCGGAHVIALSTCGKVMSWGRGASGQLGHGDIVANCLYPKLVDSLSTFNISHISAGWNHSGFVSDSGCLFTCGDGSFGQLGHGDYQSYSSPKGVSFFSTKHVEQIACGMRHSLVLLKGNAADKVYGFGSGKRGQLGVSKDKIRSLNLPQTCPGFEAAELVSVIANGDHSAALSADGQLYTWGRGFSSNSDVSVPQSLLSTLTFKQAVLGWNHALLLTSEGEVLMLGGRNHGVLGEPQRITHSNNSSDSGEHNLSKVPGLDGKQAIQIAAGSEHSAIVTDDGHLWTWGWGEHGQLGLGSTSNQTLPHMVDLKHRSCDHYLTSRVYCGSGFTFALNTRPTLSD*

Click here to download the sequence:
Link to NCBI Protein BLAST