Transcript Information: S_Transcript_94016.p1


Annotated TAIR IDAT1G30240.2
Annotated Gene Nameunknown protein; Has 169 Blast hits to 168 proteins in 75 species: Archae - 0; Bacteria - 0; Metazoa - 49; Fungi - 68; Plants - 46; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:10641241-10645838 | Reverse length=827
E-Value4.7E-193
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.9720897365941
Replicate 24.3061701777009
Replicate 34.2771902283436
Condition 2: 8 Hour
Replicate 15.9495635442748
Replicate 25.9589769051855
Replicate 35.4329714905923
Condition 3: 24 Hour
Replicate 13.0848687363296
Replicate 23.3045970955179
Replicate 33.2722055313182


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_94016.p1 GENE.S_Transcript_94016~~S_Transcript_94016.p1 ORF type:complete len:871 (+),score=195.31,RIX1|PF08167.8|8.5e-45,RIX1|PF08167.8|1.7e+03 S_Transcript_94016:274-2886(+)
ATGGCAGCCTTCGACCATTTCCGAGACATAAACGACATTACTCTAAAACCTCGTCTCCTCCATTCCCTTCTCAAACAGCACCTTCCTGATGACAAAAAACAACGTTCCTTTCAAAACCCCTCTCAACTTCCCTCCGTTATTTCTACCCTCAAAACTCACCAGCTTCTCTCTGAAGAAATCCCCAATTCTTCCGACCATAAGCACGCTTCTTCTTGGTCCTCCGCCATCGACGCTTGGGTCGACCGAGTTCTGTCGCTCGTTAAATCCAATTTGCCAGATAGATGTTGGGTTGGGGTTTGCTTGCTAGGAGTTACTTGCACTGAATGCAGCTCTCAACGTTTCTTGGCTTCTTATTCGGATTGGTTTAATATGCTCCTTTCCCATATTCAGCCATCTGGAGTTTCAAAGTTTGTGAAGGTAGCTTCTTGTGCTGCTATATCCGATTTGTTGACCAGGCTTGGTGGCTTCTCAAACTTAAAAAAGGATGGCACCTCTCATGCTAGCAAACTTGTACAGCCAATTCTGAAGATGTTAAATGAGGATGGCAATGAGGCTGTGCTGGAAGTAGCAGCTCATTCACTATCAACCATCTTAACTTACTTCCCATCAGCAGTTCTTCGTCATCATGACAATGTGGAAGGTGCAATTGTTTTAAAAATCATGTATGGAAGCTGCAGTGCCAATTCATTGAAGATTCTGGCATCTTGCCTAGGATCACTTCCAAAATCCAAGGGGGATGAGGAGAGCTGGTCTTTGATGATGCAAAAAATATTATTATCTGTTAGTTCTCTTTTGAATAATGCCTTGGAAGGTCTTGAGGAAGAGTCAAGACGTGATGAGGCTATTAGATTGTTGATTCCTCCGGGAAAAGATCGTCCACCATCCTTGGGGGAGCAAACAATGGCAGGAGAGGCATCGATCAAAGTAGAAAGGTCCCAGCAAGGGCTAATGTCCACTATATCCTCACTGTTGGAAAGTTGTTGTACAATGCTCACAAGTTCTTATCCTGTTCAGGTAGCAGTCCCTGTTCGTCCATTATTGGCTATAATTCGAAGGTTATTGATCGTGAATGGGTCTTTGCCAGAAACCTTGCAGGCATTTACAACTGTAATGCAGCAAGAATATGTCTGCTCACAACTTCCTCTTCTTCAGCTTTATGTATTGGACCTTCTTGAAGCACTTGTGAACGGAATACGCTGCCAACTCTTACCTTACGCAGCTGACATTGTCCGTATTCTAATGGGGTATTTGAAGAGATGTCGGTTGCCACAGCTTAGGACCAAGGCTTATGCAATCATTAGAGTTCTACTGATTTCCATGGGTAGTGGATTGGCTTTATTCATCTCCCAGGAACTGATTAACAATTTGTACATTGATCTAAATGCTGCTGATTCTGGAAGCAGAGCAGTAGCTGTTAGTGAGGAGTCCATTCTTGAAGCAACTTTGCAGTGTCACCCTAAGAAGAGGAAGCATGCTGGTGCAGCTGGGCCATCATTGGAACAGCAGGCTTCATATGGTTCAGAAGTAAAGGCATCGAAAGAGTGCCCAACATCTGTCGCTTTGAAAAAGGCAGCTGTAGAAGCATTGGAGGCTCTTCTTGTGGTGGGTGGTGCTTTGAAATCTGACGGTTGGCGTAGAAGAATCGAACAACTTTTGATAGAAGTTGCAACAGATGCTTGCAGAGGGCTTTTGGAACATGATGGGAAGCTTTTGCTCCGTAATGAACCTTGTGAGGATTTCCAGCTTGTGGCCTTGCATGCACTTTTGGCTTCTCTTCTTTCCCCATCTGGTGTTCGGCCACTGTATCTTGCTCAGGGTCTTGAGCTCTTTCGTAAAGGTAAGCAAAGCACTGGTACAAAGGTTGCCGAATTCTGTGCTCAAGCTCTTCTGGCCTTGGAAGTGCTCGTACATCCCAGGGCACTTCCTCTAATAGATATGTCGTTGGTAAATGGAAATGGCTTGATAGGGAGGACAGATTTTGGCAGTTCAAAATACAAGTCACCTCATGAAGATGTCAAGTTCAGAACAGCATATGGCAATCGTCATGATGTTTACGACTTCATGAATGATATGTACCTGGAAAGAGGTTCTGAAGGTGAAGTTGGGGCAGGTGCAGGTGATAAAAATCCACATTTAGATGGTAAGCGGACTGACGTTTCCAGGAAACAGAGCTTTGAAGAGCCTAATGTTATAAATGGCTCATCTGATAAGATGATTCCAGAGAAAGGAGATGAGGGTCCAGCACAAGTGAACCATTCCATTGAAATTGAAACAAATGGTGACAGTGTAATGCTGGATCATGAATGTCATGAAGAACCTTGTGATGCGTCTCAAGAGCCCCGCACCTGTGATGATGTCCCTGCTTTTGCTCTGATTCCTAATAAAACTGTATCGGAGGCTGGCGCATTGGAATCCGTGAACTGTGCATTGCCATCTGGAGAAAGTGTTCTTGCAACGGGAATTCCATCTGCTAAAGGGGCTGAAAGCTTGGTAACTTCTGGAAAAGAAAAATCATTGAAAATATCAGGAGTAGAACCGGATACAGGTTCAGATTCTGATTCGATGCCCAATATTGTAGATGCAGATCCAGATACAGATTCAGATGCCGAATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_94016.p1 GENE.S_Transcript_94016~~S_Transcript_94016.p1 ORF type:complete len:871 (+),score=195.31,RIX1|PF08167.8|8.5e-45,RIX1|PF08167.8|1.7e+03 S_Transcript_94016:274-2886(+)
MAAFDHFRDINDITLKPRLLHSLLKQHLPDDKKQRSFQNPSQLPSVISTLKTHQLLSEEIPNSSDHKHASSWSSAIDAWVDRVLSLVKSNLPDRCWVGVCLLGVTCTECSSQRFLASYSDWFNMLLSHIQPSGVSKFVKVASCAAISDLLTRLGGFSNLKKDGTSHASKLVQPILKMLNEDGNEAVLEVAAHSLSTILTYFPSAVLRHHDNVEGAIVLKIMYGSCSANSLKILASCLGSLPKSKGDEESWSLMMQKILLSVSSLLNNALEGLEEESRRDEAIRLLIPPGKDRPPSLGEQTMAGEASIKVERSQQGLMSTISSLLESCCTMLTSSYPVQVAVPVRPLLAIIRRLLIVNGSLPETLQAFTTVMQQEYVCSQLPLLQLYVLDLLEALVNGIRCQLLPYAADIVRILMGYLKRCRLPQLRTKAYAIIRVLLISMGSGLALFISQELINNLYIDLNAADSGSRAVAVSEESILEATLQCHPKKRKHAGAAGPSLEQQASYGSEVKASKECPTSVALKKAAVEALEALLVVGGALKSDGWRRRIEQLLIEVATDACRGLLEHDGKLLLRNEPCEDFQLVALHALLASLLSPSGVRPLYLAQGLELFRKGKQSTGTKVAEFCAQALLALEVLVHPRALPLIDMSLVNGNGLIGRTDFGSSKYKSPHEDVKFRTAYGNRHDVYDFMNDMYLERGSEGEVGAGAGDKNPHLDGKRTDVSRKQSFEEPNVINGSSDKMIPEKGDEGPAQVNHSIEIETNGDSVMLDHECHEEPCDASQEPRTCDDVPAFALIPNKTVSEAGALESVNCALPSGESVLATGIPSAKGAESLVTSGKEKSLKISGVEPDTGSDSDSMPNIVDADPDTDSDAE*

Click here to download the sequence:
Link to NCBI Protein BLAST