Transcript Information: S_Transcript_94044.p1


Annotated TAIR IDAT5G22010.1
Annotated Gene Namereplication factor C1
Annotated Gene Symbol(s)AtRFC1, RFC1
Annotation TypeHomolog
Chromosome Positionchr5:7280632-7287037 | Reverse length=956
E-Value1E-78
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.076606908185815
Replicate 30.12807455613611
Condition 2: 8 Hour
Replicate 10.37023247078356
Replicate 20.23304008999715
Replicate 30.22204007921856
Condition 3: 24 Hour
Replicate 10.60680231918317
Replicate 20.23608137058695
Replicate 30.26272962921996


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_94044.p1 GENE.S_Transcript_94044~~S_Transcript_94044.p1 ORF type:3prime_partial len:288 (+),score=76.11,BRCT|PF00533.22|1e-17,PTCB-BRCT|PF12738.3|4.7e-07 S_Transcript_94044:440-1300(+)
ATGAAGATGACGACGATGATTATGCTCCAATTAGTGCCAGGAAGAAGACAGATGAGACTACTCCTACCAAAAAAATTAAAGAGTGGTTCTGGTAGGGGTATTGCACAGAAAAATGTGGATGTTGATTTGAGTGATGATGAAATGGATGCTGAGAAGGAGACTGATACTCCAGCTAAATCTTGTGGAAGGGGTCATGGAGGGAGGGCCTCCTCGACACCTGCTGCTGGTGGACGAGGAAGAGGAGCTGGTAGACGAGGTGGGTTCATGAACTTTGGTGAGAGGAAAGATCCACCCCATAAAGGCGAAAAGGAAGTTCCGGAAGGCGCTCCTGATTGTTTAAATGGCTTGACTTTCGTGATTTCTGGAACACTAGACAGTTTGGAAAGGGAAGAAGCTGAAGATTTGATCAAACGGCATGGTGGTCGTGTTACTGGATCAGTCAGCAAGAAAACGAATTATCTTTTATGTGATGAGGATATTGGGGGACGGAAATCTGAAAAAGCCAAAGAACTGGGAACACGTTTTCTGACAGAGGATGGATTGTTTGATATGATTTATGCATCCAAAAATTCAATGAAAGCATCTACTGGAGACAATTCAAAAAAACCTTCTGATAGCAATGCCGCATCTACTGTGAGGAGAATTCAACAAAATGTGGAAACAAAAAAAGGTGACGGAGGCAAATCTTCTGCCAAAACTAAAGCTCCTGTATCATCTTTAGGTGCCTCTCCTGCTAAAAAGCCTCTTTCAAAGGAAGGTGCTACTGTGACGTGGACAGAGAAATATAGGCCTAAAGTTCCCAATGAAATAGTTGGCAATCAGGCACTTGTTAAGCGTCTTCATGATTGGTTGTCACATTGG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_94044.p1 GENE.S_Transcript_94044~~S_Transcript_94044.p1 ORF type:3prime_partial len:288 (+),score=76.11,BRCT|PF00533.22|1e-17,PTCB-BRCT|PF12738.3|4.7e-07 S_Transcript_94044:440-1300(+)
MKMTTMIMLQLVPGRRQMRLLLPKKLKSGSGRGIAQKNVDVDLSDDEMDAEKETDTPAKSCGRGHGGRASSTPAAGGRGRGAGRRGGFMNFGERKDPPHKGEKEVPEGAPDCLNGLTFVISGTLDSLEREEAEDLIKRHGGRVTGSVSKKTNYLLCDEDIGGRKSEKAKELGTRFLTEDGLFDMIYASKNSMKASTGDNSKKPSDSNAASTVRRIQQNVETKKGDGGKSSAKTKAPVSSLGASPAKKPLSKEGATVTWTEKYRPKVPNEIVGNQALVKRLHDWLSHW

Click here to download the sequence:
Link to NCBI Protein BLAST