Transcript Information: S_Transcript_94052.p1


Annotated TAIR IDAT5G22010.1
Annotated Gene Namereplication factor C1
Annotated Gene Symbol(s)AtRFC1, RFC1
Annotation TypeOrtholog
Chromosome Positionchr5:7280632-7287037 | Reverse length=956
E-Value1.7E-70
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.1849166559166
Replicate 21.4253215326524
Replicate 31.9857589322854
Condition 2: 8 Hour
Replicate 12.1239285107239
Replicate 22.5593635725125
Replicate 31.8934669474142
Condition 3: 24 Hour
Replicate 12.0286634735545
Replicate 22.0742115574584
Replicate 31.9349347659376


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_94052.p1 GENE.S_Transcript_94052~~S_Transcript_94052.p1 ORF type:complete len:743 (+),score=174.07,BRCT|PF00533.22|4.9e-16,BRCT|PF00533.22|1.1e+04,PTCB-BRCT|PF12738.3|1.1e-05 S_Transcript_94052:73-2229(+)
ATGGATGCTGAGAAGGAGACTGATACTCCAGCTAAATCTTGTGGAAGGGGTCATGGAGGGAGGGCCTCCTCGACACCTGCTGCTGGTGGACGAGGAAGAGGAGCTGGTAGACGAGGTGGGTTCATGAACTTTGGTGAGAGGAAAGATCCACCCCATAAAGGCGAAAAGGAAGTTCCGGAAGGCGCTCCTGATTGTTTAAATGGCTTGACTTTCGTGATTTCTGGAACACTAGACAGTTTGGAAAGGGAAGAAGCTGAAGATTTGATCAAACGGCATGGTGGTCGTGTTACTGGATCAGTCAGCAAGAAAACGAATTATCTTTTATGTAATGAGGATATTGGGGGACTGAAATCTGCAAAAGCCAAAGAACTTGGAACACCTTTTCTGACAGAGTATGGGCTGTTTGATATGATCCGTGCTTCTAGAAGATCAAAAACTCGTGCTCAAAGCAAGTCAAAGAAACCTTCTTATAGCATCCCTACATCTACTGTGAGGAAGATTCAGCAGAATGTGCGACCAGATGGTACCTCAGAAAAGGAGCTTATGGAGAATCCTTCTTTGGATTCACATCCCTTATCCACTATTCCTCAAAATCATGCCCCATTGAATTTGAGGGGCAAGAGGAAAAAGAGACGGGCTTGGAAGGATTCGAAGTGGCCAAATATTGCTGCTCAAAAAGAGGCCAAAAGAGCTCTGAGATGTACCACTTCAGATGCAGAGGTAAATGAGGAAGAGGAGGTACCCCTCATAAGATTCGGAAGACGGGGCTCCTCCAACACCCAACAAACACAACATGTAGGAAGCATAGCTAGCCCTGGCACTTCTACAATTTCCCCTACAACAGAGACTCCTATCGACTCAGATGATGTACTCATCTCCTCCCTTCTCAAGACATGTCCCTCAGCCTCAGCTGGTGGATCAATACAAACCCAACCTAAAAAGGTTGTAGATGTTCACCCTGCTCCTGAGGTAGCAGATAGTCTGAAGCCGCTTGAGAAGGACCCCAAGGAAAGCCCTGAAGTCATCTCAATAGAAGAAGAGGGAAGACACTGCTCGTCAATGATAACGGAATCCAGGGCCATAGGTGTCAAAGAAACACTCGTTACTTCTCCAAAAGAAAGAGCTATAGATGTTGATGCGATGCACTTTTTATCTGACAGTCAAGATTCTGAAGGTTCCACAGAGGTTCCAACTGAAACAGGGTGTTTTGAGGCACCTGACAATCAAGTCTCTCAGGACCCTTCAAAGATCTTTATTACCACAGAACTTTCATCAGATGCACCTTTCATCGACAGCACCTCTGATGAACATATTGTTCAATCCATTCCCCTTATTTATGAAATTCACTCTTCAACACCTGCAAAGGAACTGGCTGTTGTCCTCTACCAGCCTAGTTCTCAGACAAAAGACCATTTAATCAAGGAAGAGTCTTTAGGAGGCACGTCAAATAGTCTATCTATGTCCTCAAAGACTACTTCTGATCTGGAAGTGTCAAAGAATTTGATGCCTGAGGTACCCCCCAAGCCTGCTATTTTGGTTGAAGACCTAGATGATCTTTTAGAAGGCTTGAGAGGTGATTCATCTTCCAAGTTGCAGTCTCGATCATCCAAGGATCAAATCTTATCTGTTGCGGCAAGACTGAAATATGATCCTTCGAACCTAGAATTGATGAAAGAATGTTCTGGGCTACTTCGGGAGATTTACCCTTTGATGGCTGGGCATTGCAGACCTGCTCTTAAATCCCTTGAGCGTGCCATAATCGAGGCTCAACAACAATTCATAAGCTGGAGCCTAAAAGAGTCCGTGCTCAAGATTGACTCTTCAGAAGTGGTTTCGATCACATCCCATCTTGCCCACGCCAAAGAAAAGGTGTTGTGTTGCTCTTCTTTTCAGGAGAAACTGCAAACGCAAATTGCTGACATTGATAAAGAGATAGCCAAGTTGGTAGACTTGCGGTCCAATGCTGAAGAACAGCTCAAATATGTAAATCATGAGCTAAATAGTCTTTCCTCAACCTTGAGCCCCATCGTTGAGGTGGCAAGGGTTCGAATTGATCGTTTGAAGGCCTTCCGAGAAGCTGAGGAATCAAAAATTAGGGCCAAACATTCCATCGAGGCGTTGTTAGATGGTTTATCTAGTGTATTAGAAACGGTATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_94052.p1 GENE.S_Transcript_94052~~S_Transcript_94052.p1 ORF type:complete len:743 (+),score=174.07,BRCT|PF00533.22|4.9e-16,BRCT|PF00533.22|1.1e+04,PTCB-BRCT|PF12738.3|1.1e-05 S_Transcript_94052:73-2229(+)
MDAEKETDTPAKSCGRGHGGRASSTPAAGGRGRGAGRRGGFMNFGERKDPPHKGEKEVPEGAPDCLNGLTFVISGTLDSLEREEAEDLIKRHGGRVTGSVSKKTNYLLCNEDIGGLKSAKAKELGTPFLTEYGLFDMIRASRRSKTRAQSKSKKPSYSIPTSTVRKIQQNVRPDGTSEKELMENPSLDSHPLSTIPQNHAPLNLRGKRKKRRAWKDSKWPNIAAQKEAKRALRCTTSDAEVNEEEEVPLIRFGRRGSSNTQQTQHVGSIASPGTSTISPTTETPIDSDDVLISSLLKTCPSASAGGSIQTQPKKVVDVHPAPEVADSLKPLEKDPKESPEVISIEEEGRHCSSMITESRAIGVKETLVTSPKERAIDVDAMHFLSDSQDSEGSTEVPTETGCFEAPDNQVSQDPSKIFITTELSSDAPFIDSTSDEHIVQSIPLIYEIHSSTPAKELAVVLYQPSSQTKDHLIKEESLGGTSNSLSMSSKTTSDLEVSKNLMPEVPPKPAILVEDLDDLLEGLRGDSSSKLQSRSSKDQILSVAARLKYDPSNLELMKECSGLLREIYPLMAGHCRPALKSLERAIIEAQQQFISWSLKESVLKIDSSEVVSITSHLAHAKEKVLCCSSFQEKLQTQIADIDKEIAKLVDLRSNAEEQLKYVNHELNSLSSTLSPIVEVARVRIDRLKAFREAEESKIRAKHSIEALLDGLSSVLETV*

Click here to download the sequence:
Link to NCBI Protein BLAST