Transcript Information: S_Transcript_94080.p1


Annotated TAIR IDAT5G51660.1
Annotated Gene Namecleavage and polyadenylation specificity factor 160
Annotated Gene Symbol(s)CPSF160, ATCPSF160
Annotation TypeOrtholog
Chromosome Positionchr5:20980250-20989268 | Forward length=1442
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.854417558749
Replicate 23.5730389935146
Replicate 33.5088549889141
Condition 2: 8 Hour
Replicate 17.033588248113
Replicate 27.5407416086504
Replicate 37.5215894116327
Condition 3: 24 Hour
Replicate 11.8120179853949
Replicate 22.357394489179
Replicate 32.7231173682943


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_94080.p1 GENE.S_Transcript_94080~~S_Transcript_94080.p1 ORF type:complete len:1519 (+),score=331.77,CPSF_A|PF03178.11|4.7e-86,MMS1_N|PF10433.5|5.5e-39,MMS1_N|PF10433.5|2.6e+02 S_Transcript_94080:551-4558(+)
ATGGCTGTACTCTCATCTGGTGGTGGTGACAGTTCTAGGAGAAGAGATTCCATCATCTTAGTGTTTCGGGATGCCAAAATTTCTGTGCTGGAGTATGATGATGCAAGACATTGTCTACATGCAAGTTCAATGCACTGTTTTGAGGGTCCAGATTGGCTTCATCTTAAAAGAGGGAGGGAGTCCTTTGCTAGAGGTCCGGTGGTAAAGGTGGATCCCCAAGGAAGGTGTGGCGGAGTTCTTGTTTATGATCTGCAAATGATAATACTTAAGACTGTTCAGGCTGGTACAGGTTTAGTTGGTGATGAAGAAGGTTCCAGTTTTGGAAGTGCAGCTTCTGCTCGCATTGAATCATCATACATAATTAATCTTAGGGATTTGGACGTCAAGCATGTTAAGGATTTTATATTTGTTCATGGATATATTGAGCCTGTGTTAGTAATTCTTCACGAAAGGGAGCTTACTTGGGCCGGACGAATCTCTTGGAAGCACCATACTTGCATGCTTTCAGCCCTAAGTATCAACACAACACTGAAACAGCATCCGCTTATATGGTCAGCTACGAATCTCCCACATGATGCGCACAAGCTACTTGCAGTGCCTTCTCCTATTGGTGGTGTTCTTGTAATCTGCACTAATGCGATATACTATCAAAGTCAGTCAATGTCATGTGCTTTGGCTGTGAACAGCTTTGAAGTTTCAGCTGATGGAAGTCAAGAGATGCCAAGATCGAGTTTCAGTGTGGAGCTTGATGCTGCCCATGCCACTTGGTTGGCCAATGATGTGGCCATGCTCTCATCCAAAACTGGTGAATTGCTTCTGTTGACACTTGTTTATGATGGAAGAATTGTGCAGAGGCTTGATCTCTCGAAGTCCAGAGCATCTGTTCTTACATCGGGTATGACAACAATTGGAAGCTCTTTGTTCTTCCTGGGAAGCCGCTTGGGAGATAGTTTGCTAGTGCAATATACTTCGGGAACAGTGCCTGCAATCTCATCATCTGCTTTAAAGGAAGAGGTTGGTGATATTGAAGGTGATGTACCATCTACAAAACGGCTAAGACGCTCATCTTCTGATGCTCTGCAAGATATTGTCGGTGGTGAGGAGCTTTCATTATATGGTTCAACTCCTAATAAGGCAGATTCATCCCAGAAGTCTTTCTCATTTGCAGTAAGGGACTCTCTGATAAATGTTGGTCCCTTGAAGGATTTCTCATATGGCTTAAGGGTTAATGCAAACCCTGCTGCAACTGGAGTCGCTAAGCAAAGTAATTATGAATTGGTTTGCTGTTCTGGGCATGGGAAGAATGGTGCTCTCTGCATCCTTCAACGTTCCATTCGCCCAGAAATGATTACTGAGGTTGAACTGCCTGGGGTGAAAGGCATTTGGACTGTCTATCATAAGAGTACACGAAGTCATAATTCTGATGCATCCAAGATTGCAGCTGAGGAGGATGAATATCATGCGTATTTGATCATAAGTTTAGAGGCACGGACAATGGTTCTTGAGACTGCTGATGATCTTGCGGAAGTTACTGAAAGTGTTGACTATTATGTTCAAGGGAGTACCATAGCTGCTGGTAATTTATTTGGAAGACGACGCGTTATCCAGGTCTATGCTCATGGTGCTCGAATCCTAGATGGTTCATTTATGACACAGGAAATAAATTTGGGAGCTAGTAATCCTGAATCAGATTCAGGATCTGAGGGTTTAACTGTCACAGCTGTGTCTATTGCTGATCCTTACGTATTGTTGAAGATGAGCGACGGTAGTATCCAGCTACTTGTTGGAGATCCAACTAGCTGCACTGTTTCCATAAACATTCCTTCAGTGTTTGAAGGTTCAAAAAAGTCAATCTGTGCATGCACACTTTATCATGATAGGGGTCCTGAGCCATGGCTTCGGAAGGCTAGTACTGATGCTTGGCTTTCTAGTGGTGTCGGTGAGGCCATTGATGGATCCGATGGGGTGCCACATGATGGGGATATCTACTGTATTGCTTGTTATGAAAGTGGCACCCTAGAAATATTGGATGTGCCTAACTTTAAAAGCGTTTTTTCTGTGGAAAATTTCATCTCTGGAAAGGCTAATCTTGTTGATGCCTTTGTGAAAGAATCTCTTGAAGACCACAAAAAAATCTCAATGATTTCAGAGGATGTGTCTGGACAGGCCAGGAAAGAAAATGCCCAAAACATTAAGGTTACTGAGTTGGCTATGCAAAGGTGGTCTGGACAACACAGCCGTCCTTTTCTGTTTGGAATATTGACAGATGGAACAATTCTTTGTTACCATGCCTATCTATTTGAAGCTTCGGACAGTGCAAAAAATGAGGATGGAAAGGAAGGGAAAGATTTGATAACTGTTGACAGTGCAAGTTCTTCTAGGCTGCGAAATTTGAGGTTTCTCCGGATTCCCTTGGACATTCATACTCGTGAGGAAATATCTGGGGAAGCTGCAGCCCCACGTATTTCTGTTTTCAAAAATGTTGGTGGCCATCAGGGGCTTTTCTTATCTGGAGCAAGACCTGCTTGGTTTATGGTTTTCAGGGAGCGCCTACGTGTACATCCACAGCTTTGTGATGGAGCTATTGGTGCTTTTACAGTTCTTCACAATGTGAATTGCAATCATGGGTTTATATATGTTACCTCACAGGGGTTTCTTAAAATATGCCAGCTGCCATCTGGATTGACTTACGACAATCACTGGCCCATCCAGAAGATGCCACTGAAGGGCACTCCACACCAAGTCACCTATTTTGCTGAGAAGAATTTGTACCCACTTATTGTTTCATTTCCTGTTACTAAGCCTTTAAATCAGATTCTTTCCTCACTGGTTGATCAAGAGAGTGGCCACCAAATTGATCACGAGAATCTGAGTTCTGACGAATTGCAACGCACGTACACCATCGATGAATTTGAAATTCGGATCTTGGAGCCAGAAAAATCTGGTGGTCCCTGGCAAACTAAAGCTACTATTCCCATGCAGAGTTCAGAAAATGCACTGACTGTGCGAATGGTTACACTTCTGAATTCCACCACTAAGGAGAATGAAATACTTTTAGCTATTGGCACAGCTTATGTGCAAGGGGAGGATGTAGCAGCAAGAGGGCGAGTACTTCTATATGCCCTTGGGAGAGCCGATAATCCTCAAAATTTGGCTTCAGAGATATACTCCAAGGAATTAAAGGGTGCCATATCTGCTGTTGCATCACTTCAAGGTCATCTGCTCATTGCTGCTGGTCCCAAGATTATCTTGCATAAATGGACTGGTACAGAGTTGAATGGAGTGGCATTCTTTGATGCTCCACCCCTGCATGTCGTGAGCCTAAATATTGTTAAGAATTTTATTCTCCTTGGTGATGTTCACAAAAGTATATATTTTCTTAGCTGGAAGGAACAAGGTGCTCAGCTTAGCTTGTTGGCTAAGGATTTTGGATCACTTGATTGTTTTGCAACCGAGTTTTTGATTGATGGGAGTACACTTAGCCTTGTAGTATCAGATGAACAGAAAAATGTACAGATTTTCTATTATGCACCAAAATTATCTGAGAGTTGGAAAGGACAGAAGCTTCTTTCAAGAGCCGAGTTTCATATTGGTGCCCATGTAACGAAATTCCTGCGGTTGCAAATGCTTCCAGTTTCATCTGATAGACCTAATGTTACTGAGAAAACCAATCGATATGCTTTACTATTTGGTACCCTCGATGGGAGCATTGGTTGCATTGCACCTCTTGACGAGTTAACATTTCGGAGGCTGCAGTCACTGCAAAGGAAGCTTGTTGATGCTGTTCCTCATATTGCTGGACTGAATCCAAGATCTTTCCGTCAATTCCAGTCAAATGGCAGGGCACATCGGCCTGGGCCTGAGAACATAGTTGATTGCGAGCTGCTATGCCATTATGAGATGTTGCCACTGGAAGAACAACTAGAAATTGCCAACCAGATTGGAACCACTAGGTCACAAATTTTCTCAAATTTGAATGACCTTTCTCTAGGAACAAGCTTCTTGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_94080.p1 GENE.S_Transcript_94080~~S_Transcript_94080.p1 ORF type:complete len:1519 (+),score=331.77,CPSF_A|PF03178.11|4.7e-86,MMS1_N|PF10433.5|5.5e-39,MMS1_N|PF10433.5|2.6e+02 S_Transcript_94080:551-4558(+)
MAVLSSGGGDSSRRRDSIILVFRDAKISVLEYDDARHCLHASSMHCFEGPDWLHLKRGRESFARGPVVKVDPQGRCGGVLVYDLQMIILKTVQAGTGLVGDEEGSSFGSAASARIESSYIINLRDLDVKHVKDFIFVHGYIEPVLVILHERELTWAGRISWKHHTCMLSALSINTTLKQHPLIWSATNLPHDAHKLLAVPSPIGGVLVICTNAIYYQSQSMSCALAVNSFEVSADGSQEMPRSSFSVELDAAHATWLANDVAMLSSKTGELLLLTLVYDGRIVQRLDLSKSRASVLTSGMTTIGSSLFFLGSRLGDSLLVQYTSGTVPAISSSALKEEVGDIEGDVPSTKRLRRSSSDALQDIVGGEELSLYGSTPNKADSSQKSFSFAVRDSLINVGPLKDFSYGLRVNANPAATGVAKQSNYELVCCSGHGKNGALCILQRSIRPEMITEVELPGVKGIWTVYHKSTRSHNSDASKIAAEEDEYHAYLIISLEARTMVLETADDLAEVTESVDYYVQGSTIAAGNLFGRRRVIQVYAHGARILDGSFMTQEINLGASNPESDSGSEGLTVTAVSIADPYVLLKMSDGSIQLLVGDPTSCTVSINIPSVFEGSKKSICACTLYHDRGPEPWLRKASTDAWLSSGVGEAIDGSDGVPHDGDIYCIACYESGTLEILDVPNFKSVFSVENFISGKANLVDAFVKESLEDHKKISMISEDVSGQARKENAQNIKVTELAMQRWSGQHSRPFLFGILTDGTILCYHAYLFEASDSAKNEDGKEGKDLITVDSASSSRLRNLRFLRIPLDIHTREEISGEAAAPRISVFKNVGGHQGLFLSGARPAWFMVFRERLRVHPQLCDGAIGAFTVLHNVNCNHGFIYVTSQGFLKICQLPSGLTYDNHWPIQKMPLKGTPHQVTYFAEKNLYPLIVSFPVTKPLNQILSSLVDQESGHQIDHENLSSDELQRTYTIDEFEIRILEPEKSGGPWQTKATIPMQSSENALTVRMVTLLNSTTKENEILLAIGTAYVQGEDVAARGRVLLYALGRADNPQNLASEIYSKELKGAISAVASLQGHLLIAAGPKIILHKWTGTELNGVAFFDAPPLHVVSLNIVKNFILLGDVHKSIYFLSWKEQGAQLSLLAKDFGSLDCFATEFLIDGSTLSLVVSDEQKNVQIFYYAPKLSESWKGQKLLSRAEFHIGAHVTKFLRLQMLPVSSDRPNVTEKTNRYALLFGTLDGSIGCIAPLDELTFRRLQSLQRKLVDAVPHIAGLNPRSFRQFQSNGRAHRPGPENIVDCELLCHYEMLPLEEQLEIANQIGTTRSQIFSNLNDLSLGTSFL*

Click here to download the sequence:
Link to NCBI Protein BLAST