Transcript Information: S_Transcript_94215.p1


Annotated TAIR IDAT5G01160.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:54280-55727 | Forward length=360
E-Value1.8E-88
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.1440638561652
Replicate 25.4704867550395
Replicate 35.5554963202649
Condition 2: 8 Hour
Replicate 18.9584119160087
Replicate 28.7561948569422
Replicate 38.5176030388757
Condition 3: 24 Hour
Replicate 15.7298055057296
Replicate 24.3655702626571
Replicate 34.2381304123351


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_94215.p1 GENE.S_Transcript_94215~~S_Transcript_94215.p1 ORF type:5prime_partial len:488 (+),score=105.65 S_Transcript_94215:2-1465(+)
CCAAACCCACCCCACACCCCCAAAATCCAAATTGTCCCCAGAAAACCCCCCAAATTCTCGAAAACACTTTGGAACAACCAGAGAGCAAGAACACACACCCAGGAGAGATATAGCGACAGAAGAGAGAAGAATCAGAAGATGCTTCAAATAAGGCTGAACAAGGGATCGTCCCTTGACGGTGGGTCAGGGCCGAAGTCATTGCAAACAGAGACAGTAACAGTAGCATGCCCTGATCACCTTGTTCTTGCCGACCTTCCTGTGGCTAAGGGTCTGGGCTCCGCTACTTCTGCTTCTCTAGTCAAGATTGTGGGCCGTAGATCCAGGCGACAACTTGGTGAAAGGGTCCACTTTTGTGTTCGTTGTGATTTCCCTATTGCCATCTATGGCCGCCTGAGTCCTTGTGAGCACGCCTTCTGTCTTGATTGTGCTAGGAGTGACTCGATATGCTATCTATGTGATGAAAGGATCCAGAAGATTCAAACAATCAAAATGATGGAGGGGATTCTCATTTGTGCTGCTCCTCACTGCCTCAAGTCTTCTATGAAAAAGTCAGAATTTGAGTCCCATATTCATGATAGCCATGCCGACTTGCTTCAACCTAATATGAAGAAGGATGAAATGAATGAACCAGAGGCATCAGGCACGAAGCAGTCTTCAACTATGGATACAACTCTCCGGGGTCCGCCAAGACCAGGGTTCCCTCCTAGTTCAAATTCTCAAATGAGTGATCGTGATGATAAAGATCGTCGCCATCAGCTGAGAGAGCAACCTCCTTCAAGATCAGCTGTGCAGCCAAAGCCACCCCAGTATCATGGGCAAGCTCATTCTTCTGAGCCCCAAACTGACAGTTGGCCCATGGCCATTGATGACTCCGTCCAATCTCGGATGCAACAACAAACTCTTGATACACAGGGTGGAATGCAGCAGGATTTAAGTCAATTCTCTGAGAAGCAGCAGCAAGGGATTCTCCCTGATCCTCATCGTGACTACCCGTACCCTCAACAGCATCCGAATTTTCCAATGTCTGTCAATTCAAATCATGTGCTGCTGGCACCACCGCCATTTGGCTTTCCACCTTTTTCATCCAACGGAGGTCCTCCGTTCTATGGTGCTCCCATTTCCTTTGAGATGGCACGTTCAGACACAGCAGCAGAAGCCGGGTCAGAGCAAGGATCTGTACTGGGTTTTGCACCTGGACCAGGTGGGGCCGTCAATTTCCCTGACGGTTATCCTCGTCCTTGGAGTGGGGGTCCCGGAAATGTTCCATTTGACGCTATTCAGGGCAGTCAGGGTTTATTGGCAGCACCGCAAGGCATGCCAGCTCCACCACCTCCACCTGGACCACCTCCCCCTCACATATTGCAGCATAAACAAGGTTACTATTCAGGTGATTTGAGTAATGATGCAAAGAACTATGGATGGCAGTCAGATAGACGTGACGGGTTTGGAAGTGGCCAGGACTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_94215.p1 GENE.S_Transcript_94215~~S_Transcript_94215.p1 ORF type:5prime_partial len:488 (+),score=105.65 S_Transcript_94215:2-1465(+)
PNPPHTPKIQIVPRKPPKFSKTLWNNQRARTHTQERYSDRREKNQKMLQIRLNKGSSLDGGSGPKSLQTETVTVACPDHLVLADLPVAKGLGSATSASLVKIVGRRSRRQLGERVHFCVRCDFPIAIYGRLSPCEHAFCLDCARSDSICYLCDERIQKIQTIKMMEGILICAAPHCLKSSMKKSEFESHIHDSHADLLQPNMKKDEMNEPEASGTKQSSTMDTTLRGPPRPGFPPSSNSQMSDRDDKDRRHQLREQPPSRSAVQPKPPQYHGQAHSSEPQTDSWPMAIDDSVQSRMQQQTLDTQGGMQQDLSQFSEKQQQGILPDPHRDYPYPQQHPNFPMSVNSNHVLLAPPPFGFPPFSSNGGPPFYGAPISFEMARSDTAAEAGSEQGSVLGFAPGPGGAVNFPDGYPRPWSGGPGNVPFDAIQGSQGLLAAPQGMPAPPPPPGPPPPHILQHKQGYYSGDLSNDAKNYGWQSDRRDGFGSGQD*

Click here to download the sequence:
Link to NCBI Protein BLAST