Transcript Information: S_Transcript_94309.p1


Annotated TAIR IDAT2G42040.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: WRC (InterPro:IPR014977); Has 219 Blast hits to 219 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 215; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:17543282-17545063 | Forward length=269
E-Value8E-23
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.2672857731038
Replicate 20.98056842477844
Replicate 31.2880641074261
Condition 2: 8 Hour
Replicate 10.13539930360084
Replicate 20.14204348342684
Replicate 30.067669357476131
Condition 3: 24 Hour
Replicate 12.4965581132108
Replicate 20.93533190632545
Replicate 31.1209797513385


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_94309.p1 GENE.S_Transcript_94309~~S_Transcript_94309.p1 ORF type:5prime_partial len:315 (+),score=69.49,WRC|PF08879.6|9.1e-16,WRC|PF08879.6|1.3e+03 S_Transcript_94309:3-947(+)
CTATTTCATCACTTGGGATTCGGTGAAGGTGAGAGAAAACAAGAACCCAGCAATGATTCGAGAATTTCTGGGATTCTTCCGGTTTTTAGCAACGCAACGGCAACAAATATTGGTGCACCTGCAGCCTCACAGAATCATGATAACGTGCCGCTCGTTCTTCCCCCAGTATCAAATGAAGATCTCAAACCCTGGAGTGATAGGGAGAGAGTGATTCCACTGAAGAAAAGGAAAACAAACTTCGAGCAATCTGTGAGTAGTACCAACGTTGTTGTCGAACCTGGTTCGACAACAGGTTCGACAACAACGTTGGCAACAGATGGCTCGAAAGTTGGCAAAGATTATGCAAAGAATAAGGATTGTGGTGAACCGAATAATCTGTGTGTCATTGGTGTAAGCCATGACGACAACAGCAGCAACAGCAACAACAACAGCTCGAATACGAAGAAGGGGGCCGGGAGCAAGAGGGGGAACACAATCATGGAAGGGTCGAGGTGCAGTCGAGTGAACGGGAGAGGGTGGAGATGCTGCCAGCCTACACTGGTGGGTTATTCGCTTTGCGAGCACCACCTTGGTAAAGGGCGGATGAGGAGCATGACCACCGTTCGAGGCCGGCCATTGGCATTGAAAAAAGCTCCTCCTCCACCACCACCACCAGCACCACCGCAGGCTGGTGAGATGGCGGCCAAGAAAAGGGATGAGATTGACCATGAGGATGAGGTGGTCAAGCCAATGACTGGTGGTACTGTGAGCTCAATTGGGAAAAGGGTCAAACTTGGTGTGGTCAAAGCTCGTTCTCTTAGTAGCTTGTTGGGGCAAACAACAAACTTTACTAGTTGCAACAACAATGATGGTCATATTGGATTCGATGTCAATAATATACATCAACAACAAGGTAGCATCAATATGCATGATGAAAATAATGGTATGGTCAAGGAAGAAGCTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_94309.p1 GENE.S_Transcript_94309~~S_Transcript_94309.p1 ORF type:5prime_partial len:315 (+),score=69.49,WRC|PF08879.6|9.1e-16,WRC|PF08879.6|1.3e+03 S_Transcript_94309:3-947(+)
LFHHLGFGEGERKQEPSNDSRISGILPVFSNATATNIGAPAASQNHDNVPLVLPPVSNEDLKPWSDRERVIPLKKRKTNFEQSVSSTNVVVEPGSTTGSTTTLATDGSKVGKDYAKNKDCGEPNNLCVIGVSHDDNSSNSNNNSSNTKKGAGSKRGNTIMEGSRCSRVNGRGWRCCQPTLVGYSLCEHHLGKGRMRSMTTVRGRPLALKKAPPPPPPPAPPQAGEMAAKKRDEIDHEDEVVKPMTGGTVSSIGKRVKLGVVKARSLSSLLGQTTNFTSCNNNDGHIGFDVNNIHQQQGSINMHDENNGMVKEEA*

Click here to download the sequence:
Link to NCBI Protein BLAST