Transcript Information: S_Transcript_94369.p2


Annotated TAIR IDATMG01250.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)
Annotated Gene Symbol(s)ORF102
Annotation TypeHomolog
Chromosome PositionchrM:310514-310882 | Forward length=122
E-Value3E-06
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.937077508281
Replicate 21.5537175744729
Replicate 31.9481763468592
Condition 2: 8 Hour
Replicate 12.7032184909042
Replicate 21.8905787582868
Replicate 33.3024552627436
Condition 3: 24 Hour
Replicate 12.3075581152036
Replicate 21.9152516825082
Replicate 32.3090604032853


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_94369.p2 GENE.S_Transcript_94369~~S_Transcript_94369.p2 ORF type:complete len:142 (+),score=20.55,RVT_1|PF00078.23|5.1e-20 S_Transcript_94369:2677-3102(+)
ATGAACTTTCCCAATGATATTCCAGAGCTTATTTTTCCCCCAGAGCCATCATACAAATATGATACAGTGAGTTGGAAATTCATTGAAGAAGTACTCGGAACATTTGGTTTCCCTGTAGAGTTCATAGAGAAAATCCTAGCATGCATTACCACCTCAATATTTTCAATGAATGTAAATGGATGGCATAAGGGGTATTTTGAGGGTAAATGTGGCCTTCGGCAGGGTGACCCTCTTTCACCTTATCTTTTTGCCTTGAGTATGGAGTCCCTGTCAAGAATGTTAAGAAAGCTTAATAATAAACAAGGTTTTACTTATCACCCTAAATGCAGAAGAGTGGGAATTGCCCATTTAGTGTTTGCAGATGACTTGCTTATCTTCACAAGAGGGGATGAACCATCAATCAATGCTGTAGTGGACTGTGTCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_94369.p2 GENE.S_Transcript_94369~~S_Transcript_94369.p2 ORF type:complete len:142 (+),score=20.55,RVT_1|PF00078.23|5.1e-20 S_Transcript_94369:2677-3102(+)
MNFPNDIPELIFPPEPSYKYDTVSWKFIEEVLGTFGFPVEFIEKILACITTSIFSMNVNGWHKGYFEGKCGLRQGDPLSPYLFALSMESLSRMLRKLNNKQGFTYHPKCRRVGIAHLVFADDLLIFTRGDEPSINAVVDCV*

Click here to download the sequence:
Link to NCBI Protein BLAST