Transcript Information: S_Transcript_94442.p1


Annotated TAIR IDAT1G42480.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3456 (InterPro:IPR021852); Has 177 Blast hits to 177 proteins in 59 species: Archae - 0; Bacteria - 0; Metazoa - 140; Fungi - 0; Plants - 35; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:15936297-15938692 | Forward length=182
E-Value1.7E-77
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 111.464062070539
Replicate 212.558818671201
Replicate 39.5523915099675
Condition 2: 8 Hour
Replicate 19.5144049107209
Replicate 27.9161925955956
Replicate 38.3077149639927
Condition 3: 24 Hour
Replicate 16.833527656032
Replicate 27.438379184032
Replicate 310.218161579509


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_94442.p1 GENE.S_Transcript_94442~~S_Transcript_94442.p1 ORF type:complete len:195 (+),score=45.76,DUF3456|PF11938.4|2.7e-30 S_Transcript_94442:231-815(+)
ATGGCGGTAATATCATCATCGATTTGCAGGCTTGCAATAGTATTAGGTTTAATAGCAGTTTCCGTTTCAATCGATGATAAATGCGCTGCTTGCAATGCAGTTGCGGGAGAGCTTGAGATTGGACTCGCTAATGAAAAACCAAGGAATCATTTGGATCTGAGAAATCGTTTGGATTCTAAAGGTCAGCGTAGAGGAAAGGTAATTGATTACAGATTAAGTGAGCTGAGAGTGGTTGAACTCTTGGATGGCCTTTGTGAGAAGATGCAAGATTACACCCTTCAGAAGAAGATCAACTCGAAAGAAGAAGAATGGATTAAAGTTAGATCCTGGGAAAACCTCACCATTAACAAACAAGAAGCAAGAGCATATTCTAAAGATATATCGTCATACTGTGGAAGGTTGCTAGAGCAAACAGAAGATGAGTTGGCAGAATTGATTAAAAAAGGGTCTGTTAAACCTGGAGGTGTGGGCAAAGTATTGTGTGAGGATCTCAGCCAACACTGCACAAAGACTAGTGGCTCACAAGGGAATGCTGACAGTGATGATGATGATAATGATGATTATGATGATGATGATGAGCTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_94442.p1 GENE.S_Transcript_94442~~S_Transcript_94442.p1 ORF type:complete len:195 (+),score=45.76,DUF3456|PF11938.4|2.7e-30 S_Transcript_94442:231-815(+)
MAVISSSICRLAIVLGLIAVSVSIDDKCAACNAVAGELEIGLANEKPRNHLDLRNRLDSKGQRRGKVIDYRLSELRVVELLDGLCEKMQDYTLQKKINSKEEEWIKVRSWENLTINKQEARAYSKDISSYCGRLLEQTEDELAELIKKGSVKPGGVGKVLCEDLSQHCTKTSGSQGNADSDDDDNDDYDDDDEL*

Click here to download the sequence:
Link to NCBI Protein BLAST