Transcript Information: S_Transcript_94716.p1


Annotated TAIR IDAT3G46440.1
Annotated Gene NameUDP-XYL synthase 5
Annotated Gene Symbol(s)UXS5
Annotation TypeOrtholog
Chromosome Positionchr3:17089268-17091611 | Reverse length=341
E-Value1.7E-240
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 166.726475400161
Replicate 254.417259375095
Replicate 349.682472715006
Condition 2: 8 Hour
Replicate 160.307955124254
Replicate 256.15790576911
Replicate 367.054809229664
Condition 3: 24 Hour
Replicate 151.778105766335
Replicate 257.551544848392
Replicate 364.04781538442


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_94716.p1 GENE.S_Transcript_94716~~S_Transcript_94716.p1 ORF type:complete len:343 (+),score=86.14,GDP_Man_Dehyd|PF16363.1|5.3e-56,Epimerase|PF01370.17|4.5e-46,Polysacc_synt_2|PF02719.11|5.2e-08,Polysacc_synt_2|PF02719.11|0.011,3Beta_HSD|PF01073.15|4.5e-12,NAD_binding_4|PF07993.8|0.011,NAD_binding_4|PF07993.8|2.4e-06,RmlD_sub_bind|PF04321.13|1.8e-08 S_Transcript_94716:1192-2220(+)
ATGGCATCAAACGGGGATAAGCAATCAGGAACCAAGCCACCCCCACCTCCTTCTCCTTTGAGAAATTCTAAATTTTGTCAGTCAAACATGAGAATTTTGGTAACTGGAGGAGCTGGATTTATTGGCTCCCATCTTGTCGATAGGTTGATGGAAAATGAGAAGAATGAGGTGATTGTTGCTGATAATTACTTTACCGGCTCAAAGGACAACCTTAGGAAATGGATTGGCCATCCAAGATTTGAGCTTATCCGTCATGATGTCACAGAACCATTGTTGATTGAAGTTGATCAGATATATCACCTCGCATGTCCAGCATCTCCAATTTTTTACAAGCACAATCCTGTGAAGACTATCAAAACAAATGTCATGGGCACTTTGAACATGCTAGGACTTGCCAAACGTGTTGGAGCAAGGATTTTGCTTACTTCTACTTCAGAGGTGTATGGTGATCCTTTAATTCATCCTCAACCAGAAACCTACTGGGGAAATGTTAACCCTATTGGAGTTCGGAGCTGCTATGATGAAGGGAAGCGTGTTGCTGAAACTTTGATGTTTGATTATCACAGGCAGCACGGGATAGAAATTCGTGTGGCCCGTATCTTTAATACCTATGGGCCTCGCATGAATATTGATGATGGCCGGGTTGTGAGCAACTTCATTGCTCAAGCTCTTAGAGGTGAACCACTGACAGTTCAGGCTCCGGGAACACAAACTCGCAGTTTCTGTTATGTTGCTGACATGGTCGATGGTCTCATTAGACTCATGGAAGGAGAGAACACTGGACCAATCAACCTTGGAAACCCTGGTGAATTTACCATGCTTGAACTTGCTGAGACTGTGAAAGAGCTGATCAACCCAGATGTGAGGATTATATCAGTGGAGAACACACCTGATGACCCAAGACAAAGGAAGCCTGATATTACAAAGGCGAAGGAAGTTCTTGGATGGGAACCAAAGATCAAGTTGCGGGAAGGGCTCCCCCTCATGGAAGAGGATTTCCGCAAGAGGCTTGGAGTTCCAAAGAATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_94716.p1 GENE.S_Transcript_94716~~S_Transcript_94716.p1 ORF type:complete len:343 (+),score=86.14,GDP_Man_Dehyd|PF16363.1|5.3e-56,Epimerase|PF01370.17|4.5e-46,Polysacc_synt_2|PF02719.11|5.2e-08,Polysacc_synt_2|PF02719.11|0.011,3Beta_HSD|PF01073.15|4.5e-12,NAD_binding_4|PF07993.8|0.011,NAD_binding_4|PF07993.8|2.4e-06,RmlD_sub_bind|PF04321.13|1.8e-08 S_Transcript_94716:1192-2220(+)
MASNGDKQSGTKPPPPPSPLRNSKFCQSNMRILVTGGAGFIGSHLVDRLMENEKNEVIVADNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPASPIFYKHNPVKTIKTNVMGTLNMLGLAKRVGARILLTSTSEVYGDPLIHPQPETYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRVARIFNTYGPRMNIDDGRVVSNFIAQALRGEPLTVQAPGTQTRSFCYVADMVDGLIRLMEGENTGPINLGNPGEFTMLELAETVKELINPDVRIISVENTPDDPRQRKPDITKAKEVLGWEPKIKLREGLPLMEEDFRKRLGVPKN*

Click here to download the sequence:
Link to NCBI Protein BLAST