Transcript Information: S_Transcript_95779.p1


Annotated TAIR IDAT3G45630.1
Annotated Gene NameRNA binding (RRM/RBD/RNP motifs) family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:16748751-16753190 | Reverse length=989
E-Value2.1E-254
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 122.995700096418
Replicate 229.195710841643
Replicate 331.388462480147
Condition 2: 8 Hour
Replicate 141.160073738311
Replicate 240.768893103657
Replicate 340.500110449465
Condition 3: 24 Hour
Replicate 134.824561836462
Replicate 229.06688843918
Replicate 326.22602869697


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_95779.p1 GENE.S_Transcript_95779~~S_Transcript_95779.p1 ORF type:complete len:1030 (+),score=205.12,zf-RING_4|PF14570.2|1.1e-20,RRM_1|PF00076.18|2.9e-07,RRM_5|PF13893.2|4e-05 S_Transcript_95779:276-3365(+)
ATGAGCGATGAGGGTGAGAAGACCTGTCCCCTTTGTGCTGAGGAGATGGATCTGACTGATCAGCAATTGAAGCCTTGCAAATGTGGCTATGAGATTTGTGTATGGTGTTGGCATCACATCATGGACATGGCTGAGAAGGATGACACAGAGGGACGCTGCCCTGCTTGCCGTACTCCCTATGATAAGGAAAGAATTGTGGGGACAGCTGCCAAATGTGAAAGGTTGGTGGCAGAGATTAATATGGAAAAGAAGCACAAGACACAGAAATCTAAGGTTAAAACATTTGAAAGCAGGAAACAGCTAAGTAGTGTTCGTGTCATTCAGAGGAATCTTGTCTACATAGTTGGCTTACCTCTTAATCTCGCTGATGAAGATCTTCTGCAACGGAAAGAATATTTTGCCCAGTATGGCAAGGTTTTGAAGGTGTCCATTTCCCGTACTTCAGCAGGCACTATCCAACAGTTTGCCAACAATACATGTAGTGTATATATTACATATGCAAAAGAAGAGGAAGCAGTTCGTTGCATTCAGTCGGTTCATGGATTTATATTGGATGGCAGACCCTTGAGGGCGTGCTTTGGAACCACAAAGTATTGTCATGCATGGTTGCGGAATGTGCCCTGCAGCAATCCTGATTGTCTGTACTTGCATGAGATTGGTTCTCAGGAGGACAGCTTTACGAAGGATGAAATCATTTCTGCATACACCAGGAGTAGAGTTCAGCAAATTACTGGGTTTACAAATAATATGCAACGGCGCTCAGGAAATATGTTGCCTCCCCCAGCAGATGATTACTGCAATAACAGTACCCCTGTGATTGCGAAACCTGTGGTTAAAAGCTCTTCAAATAGTACGACTAGCAGTGTTACGACAAGCAACATAAGAGGCTCGCCTCCAACTACCAGTGCTGGTAGATCAGGTGCTCTTCCACCAGCAGCCTCATGGGGAGCATGTGGATCCACCTGTAATGTTGCTACTGGTAACGTAGCAAGTTCGAATGGACCTACCCAGCAGAGGGTTGAAGTAGTTAGTGGGTCGCCGGCACTTTCACCAACAATGTCTAGTGGCACACAAGCTTCTGTTTTGCCCGTCGATGGTGGAAAGAGGCATATGCCTGATGAGGAAATTCATGGGAAGCCAATTACTAATAAGCCAGAGATTTTAGATACTGTGAAACAGCATGCGGGAGTAAATTCTCAAACAAATGTCTCAGAGGTGTCTTCTGCACCTTTAGGTGCTCCAACTGTTAAGTCAGTCAGTCATCCATCTTGTCAAGCGACAACAGAGGCTAATGCTAGGCAGCATTCTTTGATGGTTGATTCTACACTCTCTATAGATAGGCAACCTTGTTCTACAGGTCTAGATGAAGGCGGGAGTTCTATTGCCAATGAAAAGACTCAGAAACTGAGTGCCCAGATATCATCTCTGAGCATTGACAGCCGACTAAGCGATAAACATTCTAATGTTATCAGACCTAATGGTTTGTGTTTAGATAACTTCCTATCATCTGGAAGTCGAGAATTACTGAGCCATGAGTCTGAGAAACTTCAAGAACGTTCAACTCCAGTTGCTGCTACTTCCGCTGTGAGTGTCATTGATTCAGTTATTGCTTCAAATGAAGAGCATGATTGGAGATCAGACAATCAACCTCCAGCAGGACAGAATTTAACTTCTGAAACAGAAGACGATTTTGATAGCCAGAGACTTAGTGATGCTATTGTAGTCAGCCAGGCAACTGTACCTTCTTCATCCCCACTCCATCTTTTGAGCCATTTAAGGGGTCCTTTGCAGCAGCATATTGATACTGCTGGTGGAGTCAACTATACTTTAAATGCTCCAATTTTGAATAGAATGCCTGATGAAGGTCCGGTGACAAGTTTATCTGGTGGGTCAAATGGGTTCCTAGATGATTTTGTCAGCCATTCTTCAGGTCAAGGTAATTCTTGTTCTCTACTAAATCTTGGGCAAGGCAATCACATCAGAAGGTTTGAAGGTGGTCTTCCCAATGTTGACTCACAACCTACTCCAGATATGGGTGAGAGCAGTATTATAGCAAATATTTTGGACCTTGATTCATGGGATGAATCTTTGACTTCTCCTCAGAATTTGGCCAAGTTGTTGAGTGAAAATGATAAACAGGATCATCCTATCAAGTTGGCGAATCCCTGGAAAGGTCAAATCAGCAATCAGTCAAGGTTTTCGTTTGCAAGGCATGAGGAGTCCAGAAATCATTTATTTGATTTAGAGTCGTCACTGTGCAATAATACTGGTCAAGTAGCCAAGAATCCCCTATATGGACAGACATTTGTCGAAAATAGAGAACCATATCTTGATAGACTCAGCAATGGTTTTGGATTTCCTCAACGTAATATTGAGCTGTCAGAAAATTTGACAATTGGCAATTCTTTATTTTCATCCACATCTGTATCAAGATCTCAAATTTCTGCTCCCCCTGGGTTTTCTGCACCAAGTAGACCCCCACCTCCAGGTTTTCATTCCCATGAGAGAAGTGATCAATCTTTTGGCATAAAATCCGGGAACCATCTGCATGAGACTTCTTCCTTCTTGAGAAATCCTTATCAGGCATCGCCTAGTGGAAACATTGGTACTGCCAATGATATTGAATTTATGGATCCTGCAATTCTTGCGGTTGGCAAAGGGAGGCTTCCTAATGGTGCTAGCAACTCAAGCATGGACATGAGACCAATTTTTCATGTACAGACTCCCACATTTGATGTTAGGGATAACGAGTCAAGACTTCAGCTATTGATGCAAAGATCTCTCTCCCCTCATCAGAATATTAGATATACTGATGTTAGGGACAATTTTTCTCCGCCAAATGATGCCTATGGCTTCACTACAAGACATATAGAGCAGTCACAAGCTAGCAATCTCCCCCCTTTTTCACAGTTCACGCTTAACCAAGCCAGAAATACAGTAGTATCTAATGGCCATTGGGACAGCTGGAATGAGATTCCCCCAGCAAATGATATGGGGATTGCGGAGCTCCTTCGAAATGATAGACTGGGGTTTAACAAGTTTGGAATGACCAATTCTGGGGACTTATATAACAGGAGTTTCAGGATGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_95779.p1 GENE.S_Transcript_95779~~S_Transcript_95779.p1 ORF type:complete len:1030 (+),score=205.12,zf-RING_4|PF14570.2|1.1e-20,RRM_1|PF00076.18|2.9e-07,RRM_5|PF13893.2|4e-05 S_Transcript_95779:276-3365(+)
MSDEGEKTCPLCAEEMDLTDQQLKPCKCGYEICVWCWHHIMDMAEKDDTEGRCPACRTPYDKERIVGTAAKCERLVAEINMEKKHKTQKSKVKTFESRKQLSSVRVIQRNLVYIVGLPLNLADEDLLQRKEYFAQYGKVLKVSISRTSAGTIQQFANNTCSVYITYAKEEEAVRCIQSVHGFILDGRPLRACFGTTKYCHAWLRNVPCSNPDCLYLHEIGSQEDSFTKDEIISAYTRSRVQQITGFTNNMQRRSGNMLPPPADDYCNNSTPVIAKPVVKSSSNSTTSSVTTSNIRGSPPTTSAGRSGALPPAASWGACGSTCNVATGNVASSNGPTQQRVEVVSGSPALSPTMSSGTQASVLPVDGGKRHMPDEEIHGKPITNKPEILDTVKQHAGVNSQTNVSEVSSAPLGAPTVKSVSHPSCQATTEANARQHSLMVDSTLSIDRQPCSTGLDEGGSSIANEKTQKLSAQISSLSIDSRLSDKHSNVIRPNGLCLDNFLSSGSRELLSHESEKLQERSTPVAATSAVSVIDSVIASNEEHDWRSDNQPPAGQNLTSETEDDFDSQRLSDAIVVSQATVPSSSPLHLLSHLRGPLQQHIDTAGGVNYTLNAPILNRMPDEGPVTSLSGGSNGFLDDFVSHSSGQGNSCSLLNLGQGNHIRRFEGGLPNVDSQPTPDMGESSIIANILDLDSWDESLTSPQNLAKLLSENDKQDHPIKLANPWKGQISNQSRFSFARHEESRNHLFDLESSLCNNTGQVAKNPLYGQTFVENREPYLDRLSNGFGFPQRNIELSENLTIGNSLFSSTSVSRSQISAPPGFSAPSRPPPPGFHSHERSDQSFGIKSGNHLHETSSFLRNPYQASPSGNIGTANDIEFMDPAILAVGKGRLPNGASNSSMDMRPIFHVQTPTFDVRDNESRLQLLMQRSLSPHQNIRYTDVRDNFSPPNDAYGFTTRHIEQSQASNLPPFSQFTLNQARNTVVSNGHWDSWNEIPPANDMGIAELLRNDRLGFNKFGMTNSGDLYNRSFRM*

Click here to download the sequence:
Link to NCBI Protein BLAST