Transcript Information: S_Transcript_95916.p1


Annotated TAIR IDAT5G20320.1
Annotated Gene Namedicer-like 4
Annotated Gene Symbol(s)DCL4, ATDCL4
Annotation TypeOrtholog
Chromosome Positionchr5:6859571-6869068 | Reverse length=1702
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.2487644173124
Replicate 25.3493615211827
Replicate 36.0511751685638
Condition 2: 8 Hour
Replicate 111.923182644139
Replicate 210.713659722523
Replicate 311.994985413418
Condition 3: 24 Hour
Replicate 18.3268795935196
Replicate 26.246901019536
Replicate 36.6477885434474


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_95916.p1 GENE.S_Transcript_95916~~S_Transcript_95916.p1 ORF type:complete len:1658 (+),score=340.10,Ribonuclease_3|PF00636.22|5.5e-24,Ribonuclease_3|PF00636.22|1.1e-23,Ribonucleas_3_3|PF14622.2|2.6e-08,Ribonucleas_3_3|PF14622.2|3.8,Ribonucleas_3_3|PF14622.2|2.4e-16,Dicer_dimer|PF03368.10|1.7e-22,Dicer_dimer|PF03368.10|1.5e+02,Dicer_dimer|PF03368.10|3.2e+03,Helicase_C|PF00271.27|3.1e-17,DEAD|PF00270.25|2.3e-15,ResIII|PF04851.11|5.7e-14,DND1_DSRM|PF14709.2|6.2e+02,DND1_DSRM|PF14709.2|1.3e-12,dsrm|PF00035.21|8.6e+02,dsrm|PF00035.21|0.12,dsrm|PF00035.21|0.0041,SNF2_N|PF00176.19|7e-06 S_Transcript_95916:297-5270(+)
ATGGGTGACGATCGCCTTGCAATTACTGACATTGGCGATTCTTTGGACCAAACGGAAATGGGCCCTACTTCTAACGCCTCCATTTCTAAACAAGACCCCCGCAAAATTGCTAGAGGGTATCAGTTAGAATTGAGCAGAAAAGCTCTGGAAGAAAATATGATCGTGGTTTTAGAGACTGGCTGTGGAAAGACCCTCATTGCTATTTTGTTGATGAGCTATATGGATCATTTAATTAAGAAGCCCCAAAAGCAATTGTGTGTTTTCCTTGCTCCTACTGTCCTCTTAGTTCATCAGCAAGCTGAGGTCATTGAACAATTTACTGATTTCAAGGTTGGAATCTATTACGGTGATGCAAAGCATCTAAAGACTCATAGTGCCTGGCAAAAAGAAGTTGAGCAATATGAGGTTCTTGTCATGACCCCACAAGTGTTATTGCATAGCTTATGTCATTGCTTCATCAGAATGGAGGCAATTGCTCTGCTGATATTCGATGAGTGTCATTATGCGCAAGTTGAGAGCAATCATCCATATGCAGAAATAATGAAGGTATTTTATAAAACTGAAGGGGCTAAAATTCCTCGTATACTTGGCATGACTGCGTCCCCCATATGTGGAAAAGGTGCTTCTGTCAGTAGTCTTGAAGCTTTACTTCATGCCAAGGTGTATACTGTTAATAACAAGAACGAACTGGAGACTGTTGTTGTATCTCCTTCTGTTGAAGTGTATCACTACAGGTCAAATACAGGATCATTATCAGGTTCCCACCACAAATGTTTGGAAAAACTAGAGGAGATTAAGCGTCAGTGTATATCTGTGCTTTGCAGGACTGCAGATGATCCCAGCAGAGTACGAAATATCAAGAAACTTCTCAAAAAACTGCATAATAATATGGTGTTTTCTTTAACCAGTCTTGGTTTTTGGGGTGCATTGCAAGCCGGTCGGATCCTTCTGAATGGGGATGGTTGTGAGAGAAATGAGCTAATAGAGGCCAAAGCAAACTCTGGTGATGACCTCATACATAGAGAATACCTTGCTCAGATTGTATCTCTATTAGAATCAGAATGTGTGGGAGATATTGTTAACGGCATTGCATCTGATTTATCTTGTACGAAGGTTCTAAAGGAGCCGTTTTTCTCTCACAAGGTTTTGCGTCTTATTGGGATCCTGTCAAACTTCAGGTCAAGGCCAGACATGAAATGCATTATATTTGTGAATAGGATCATAATTGCAAGATCCCTGTCATATGTTCTGGGACAAATCAAGATTTTGTCACCTTGGAAGTGTGATTTCCTAGCGGGAGTTCATTCTGGATTGAAACGTATGTCCAGGAAAACCATGAATATTATCCTGGAAGAATTTCGAACTGGAAAGCTGAATTTGTTGGTTGCTACTAAAGTTGGTGAAGAAGGACTTGATATTCAAACCTGCTGTCTTGTAATACGGTTTGATCTTCCTGAGACTCTTGCAAGCTTTATACAGTCCAGAGGCCGTGCACGAATGCCTCAGTCAGAATATGCATTTTTGGTTGACAGTGACAGTGAGAGGGAGATGAATCTAATGGACAGTTTCAGAAAAGATGAAGACCATATGAACATGGAAATTAGAACTAGAAAATCCAATGAAGTTATTGCCAATATTAAGGAAGAAGTGTATTCAGTTGGTTCAACTGGTGCTACAATCAGTACTCAAACCAGTGTTTCATTGCTCTATCATTACTGTTCAAAACTGCCCCATGATGAGTATTTTAACCCCAAGCCAGATCTATTTTATGTTGACGATGCAGAAGGAACCATATGCTACATTGTTCTTCCTTGTAATGCTCCTATCCATCACATTGTAAGCTCACCTCATTCTTCAACTGAAGCAGCCAAGAAAGATGCATGTCTAAAGGCAATCAAAGAACTGCATCAAATTGGTGCTTTAACTGAGTATCTACTGCCAGAACAAGTTGATATGGAAGACGAATCCGGTTCTGAACTTCATGATTCTGATGACAGTGAAGATGAAGATACACCATTTGAACTGCAGGAGATGTTAATTCCTGCTGCACTAAAGGAACCATGGTCTGATGTGGACAACCTCGTGTGTCTTAACTCATACTTTATAAGGTTTATGCCTAAACCGCATGACAGACAGTATAAAGAATTTGGCCTTTTCGTCAAAGCTCCTCTGCCTAGTGAGGCTGAGACAATGGAAATTGATCTTCATCTGGCCTATGGTAGGTCTGTGTTGACAGATCTTGTTCCTTCTGGAGTTGCTGAATTCAATGAAGAGGAGGTGCTGTTGGCTCAGAATTTTCAGGAAATGTTTCTCAAAATGATTCTTGATCGGACAAAATTCATGAGTAGTCATGTTCCTCTCAAGAATTGCAGAATTACTGAATCAGATTCACCAAGCTTCTACCTATTGCTTCCAGTAACTCATCATGAATATGAAAAAACAATGTCTGTAGATTGGATGATTATTAAGAGATGCTTATCTTCTCCGATTTTTGCACCTCCTACTCATGCAGTTGACTGTCAGATTCCTTTGGATGAATACTTGCATCTTGCTGAAGGACCTACGTCTGTGAATTTGATTCTGAATAGCTTAGTATATGTTGCGCACAAGAATTCATTCTTTTTTATTACAAAAGTCCTTCCTGACAAGAATGGGTACAGCCTCCACAACAATTCCACAAGCCATGTAGAGCAGTTGAGTGAAAAGTTTCAGTTGGTGCACCCAGGGCAACCTCTGCTACAAGCTAAACAGCTCTTTTGCTTGCGCAATTTATTGCATGATCGCAAAAAAGGAAAATCTGAATCAAATAATCTAGAAGAGCACTTCTTTGAACTACCACCTGAGGTATGTCAATTGAAGATAATTGGTTTCTCTAAGGACATTGGAAGCTCATTATCCTTGTTGCCATCTGTAATGCATCGCCTGGAAAACTTGCTTGTGGCTATTGAATTGAAGCATATGCTGTCTAAGTCATTTTCTGAGGGCTCAGTTGTTTCTGCTGAACGTGTTCTTGAAGCAGTAACTACGGAAAAATGCCTTGAGCGCTTTTCATTGGAGAGGCTTGAAGTTCTTGGTGATGCTTTTCTTAAGTTTGCAGTGGGGCGCTACCTTTTTCTTGAGCACGAAGCTTTTGATGAGGGACAGTTAACAAGGAAGCGTTCTAGTGTTGTAAACAACTCAAATCTTTGCAAGCTGGCTATTAAAAATAAATTGCAGGTATATATACGCGATCAAGAATTTGATCCTAGCCAATTTTTCGCTCTGGGTCATCCATGTCCTACCATATGCACCAAGCCGGAAGAAAAGTCTATTCATTCTCAATCTGAAGCTAACTTGAGAAGGGGAGCTGATAATCGTCAAGTGAGGTGCAGTAAGAATCATCACTGGTTATCCAAGAAAACAATTGCAGATGTGGTTGAAGCTCTTCTTGGTGCTTACATTGTTGACAGTGGTTTTAAAGCTGCAATTGCTTTTCTTAGATGGTTTGGGATACAAGTTGAAATTGATGTTTCTCAAGTATTACGTGCTTGGACTGCAAGTGCCACTTTCAAGTCACTTGCAGATTGCATCGATATTGCTGCTATTGAAGGTTATTTGGGTCATCAGTTCGCCCACAAAGGCTTACTTCTGCAAGCATTTATACACCCATCATACAATCGGCATAGAGGAGGTTGCTATCAGAGATTGGAGTTTCTTGGTGATGCTGTGTTGGATTACCTAATCACATCCTATTTATACTCTGTCTTTCCTGACCTGAAACCTGGCCAATTGACTGATTTAAGATCATCCCTCGTGAACAACACGTCATTTGCCAGAGTTGCAACAAGTCGAATGTTGTACAAATTCATTATATGTGAGAATAGCAACCTATCTGATGCTATTAACAAATATGTGAACTTTACTGGAAAATGTGCTTCAGAAAGGGATATACTTGAGGAGCCACCATGTCCCAAGGCCCTTGGTGACTTGGTGGAGTCATGTATTGGCGCAATTCTTCTTGATGCAGGATTTGATTTAAATCTTGTGTGGAAGGTGATGCTCACCGTTCTGGACCCTATCATGGGCTTTTCTAGTTTGCAGCCTAGTCCTGTAAGAGAACTTTTCGAACTTTGCCAATATCATGGTTGGGATTTACAATTTCTGTCATTAAGAAAGAACAGAGTTTTTATGGTGGAGGCTGTAGTGCACGGAAAACATTTTCATTCAGCTGCCTCTGTGACAAATCGGAGTAAACGAATGGCTAGGAGAATGGCTGCTCAACAAGTAACTACAAAATTAAAGGCTCAGGGTTACCGACTGGAGATGAGATCATTAGAGGAGCTTTTGAAGACACTGTCCAAGATTGAAGCAAGGCTAATCGGATATGACGAGTTACCACTAGCTCTAGTTTCTTCCAGTGCCTCGATCGATGTTGGAAACTTGGAGGATTATCCTGATAATTGCATAAATACAAAGCTTAATTTTGCAAACTTGAGTTTGGAGGATCATCCTAATAATTGCGTAAATACAGAGCTCAATATTGCAAACTTGAGTTTGGAAGATCACCTCAACAGTCCAAATTTGGAGGTCAACATGAAGCTAGAGCCGACATGTATCTCTAGTTTCCGAAAGAAATCCTCCAGAGCTGGCCCATCTTTATTAAAGAGAAGAGACCACAGTCAAACTATTCAGGAAGAAATCTTCGACGTTGATCTAGATGTGCATGAAACTTTGCACAAAAGAACAGCGAGATCACAATTAAATGATATATGTGCTGCAAATTGCTGGAGGTTGCCGTTGTATGTGTGTTGTAAGGAGGAAGGGCCAAGCCATTTGAAATTGTTCACTTTCAAGGTGGTGATTGTGATGGAGGAAGCTGAAGATGTGTTATTGGAATGCATTGGTCAGCCTCAAGCAAAGAAGAAAGTAGCAGCAGAGGAAGCTGCACAAGGTGCACTTTGGTTTTTGAAGAAGGAAGGTTACAACAATAATTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_95916.p1 GENE.S_Transcript_95916~~S_Transcript_95916.p1 ORF type:complete len:1658 (+),score=340.10,Ribonuclease_3|PF00636.22|5.5e-24,Ribonuclease_3|PF00636.22|1.1e-23,Ribonucleas_3_3|PF14622.2|2.6e-08,Ribonucleas_3_3|PF14622.2|3.8,Ribonucleas_3_3|PF14622.2|2.4e-16,Dicer_dimer|PF03368.10|1.7e-22,Dicer_dimer|PF03368.10|1.5e+02,Dicer_dimer|PF03368.10|3.2e+03,Helicase_C|PF00271.27|3.1e-17,DEAD|PF00270.25|2.3e-15,ResIII|PF04851.11|5.7e-14,DND1_DSRM|PF14709.2|6.2e+02,DND1_DSRM|PF14709.2|1.3e-12,dsrm|PF00035.21|8.6e+02,dsrm|PF00035.21|0.12,dsrm|PF00035.21|0.0041,SNF2_N|PF00176.19|7e-06 S_Transcript_95916:297-5270(+)
MGDDRLAITDIGDSLDQTEMGPTSNASISKQDPRKIARGYQLELSRKALEENMIVVLETGCGKTLIAILLMSYMDHLIKKPQKQLCVFLAPTVLLVHQQAEVIEQFTDFKVGIYYGDAKHLKTHSAWQKEVEQYEVLVMTPQVLLHSLCHCFIRMEAIALLIFDECHYAQVESNHPYAEIMKVFYKTEGAKIPRILGMTASPICGKGASVSSLEALLHAKVYTVNNKNELETVVVSPSVEVYHYRSNTGSLSGSHHKCLEKLEEIKRQCISVLCRTADDPSRVRNIKKLLKKLHNNMVFSLTSLGFWGALQAGRILLNGDGCERNELIEAKANSGDDLIHREYLAQIVSLLESECVGDIVNGIASDLSCTKVLKEPFFSHKVLRLIGILSNFRSRPDMKCIIFVNRIIIARSLSYVLGQIKILSPWKCDFLAGVHSGLKRMSRKTMNIILEEFRTGKLNLLVATKVGEEGLDIQTCCLVIRFDLPETLASFIQSRGRARMPQSEYAFLVDSDSEREMNLMDSFRKDEDHMNMEIRTRKSNEVIANIKEEVYSVGSTGATISTQTSVSLLYHYCSKLPHDEYFNPKPDLFYVDDAEGTICYIVLPCNAPIHHIVSSPHSSTEAAKKDACLKAIKELHQIGALTEYLLPEQVDMEDESGSELHDSDDSEDEDTPFELQEMLIPAALKEPWSDVDNLVCLNSYFIRFMPKPHDRQYKEFGLFVKAPLPSEAETMEIDLHLAYGRSVLTDLVPSGVAEFNEEEVLLAQNFQEMFLKMILDRTKFMSSHVPLKNCRITESDSPSFYLLLPVTHHEYEKTMSVDWMIIKRCLSSPIFAPPTHAVDCQIPLDEYLHLAEGPTSVNLILNSLVYVAHKNSFFFITKVLPDKNGYSLHNNSTSHVEQLSEKFQLVHPGQPLLQAKQLFCLRNLLHDRKKGKSESNNLEEHFFELPPEVCQLKIIGFSKDIGSSLSLLPSVMHRLENLLVAIELKHMLSKSFSEGSVVSAERVLEAVTTEKCLERFSLERLEVLGDAFLKFAVGRYLFLEHEAFDEGQLTRKRSSVVNNSNLCKLAIKNKLQVYIRDQEFDPSQFFALGHPCPTICTKPEEKSIHSQSEANLRRGADNRQVRCSKNHHWLSKKTIADVVEALLGAYIVDSGFKAAIAFLRWFGIQVEIDVSQVLRAWTASATFKSLADCIDIAAIEGYLGHQFAHKGLLLQAFIHPSYNRHRGGCYQRLEFLGDAVLDYLITSYLYSVFPDLKPGQLTDLRSSLVNNTSFARVATSRMLYKFIICENSNLSDAINKYVNFTGKCASERDILEEPPCPKALGDLVESCIGAILLDAGFDLNLVWKVMLTVLDPIMGFSSLQPSPVRELFELCQYHGWDLQFLSLRKNRVFMVEAVVHGKHFHSAASVTNRSKRMARRMAAQQVTTKLKAQGYRLEMRSLEELLKTLSKIEARLIGYDELPLALVSSSASIDVGNLEDYPDNCINTKLNFANLSLEDHPNNCVNTELNIANLSLEDHLNSPNLEVNMKLEPTCISSFRKKSSRAGPSLLKRRDHSQTIQEEIFDVDLDVHETLHKRTARSQLNDICAANCWRLPLYVCCKEEGPSHLKLFTFKVVIVMEEAEDVLLECIGQPQAKKKVAAEEAAQGALWFLKKEGYNNN*

Click here to download the sequence:
Link to NCBI Protein BLAST