Transcript Information: S_Transcript_95959.p1


Annotated TAIR IDAT3G05070.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: mRNA splicing factor, Cwf18 (InterPro:IPR013169); Has 292 Blast hits to 292 proteins in 153 species: Archae - 0; Bacteria - 0; Metazoa - 118; Fungi - 83; Plants - 38; Viruses - 11; Other Eukaryotes - 42 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:1416480-1417533 | Forward length=144
E-Value9.8E-60
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 154.965414315798
Replicate 256.094281946884
Replicate 351.953067006744
Condition 2: 8 Hour
Replicate 163.41864440716
Replicate 260.243147971028
Replicate 360.603880445535
Condition 3: 24 Hour
Replicate 155.825813364852
Replicate 254.659780860603
Replicate 349.949538919936


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_95959.p1 GENE.S_Transcript_95959~~S_Transcript_95959.p1 ORF type:complete len:153 (+),score=54.81,cwf18|PF08315.8|3.4e-32 S_Transcript_95959:173-631(+)
ATGTCTGCTGAAGAAGAATCGATTGAACATGCAGCAAGAGAGAGGAGAGAGAGACTTAGGGCTTTGAGAGCTGCTAAAGAACTATACGAAACTCCTGATGATGAAGATTCTTCTACTCAACCTAAGAATGGTGATCCTTCAAATAACGACGATAATGATGGCCTTAACCTGAAATTTCGAAACTACCTTCCCCACGACAAAGAACTTCAGGAGGGTAAACTTGCTGCTCCAGAGTTACCAAAATTTGAGGACCCTGTTGCAACAGCTCCTCCACCTGAGAAAAAGGAGGATCCATTTTTGAACATTGCACCAAAAAAGCCAAACTGGGATCTAAAGAGGGATGTGCAAAAAAAGCTGGACAAATTGGAAAGGCGGACACAAAAGGCATTGTATAAGCTCATGGAGGAACAAGAGAAACAAAGGCAGCTGGCCGATGGGAATGCAGTCGCTGAAGATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_95959.p1 GENE.S_Transcript_95959~~S_Transcript_95959.p1 ORF type:complete len:153 (+),score=54.81,cwf18|PF08315.8|3.4e-32 S_Transcript_95959:173-631(+)
MSAEEESIEHAARERRERLRALRAAKELYETPDDEDSSTQPKNGDPSNNDDNDGLNLKFRNYLPHDKELQEGKLAAPELPKFEDPVATAPPPEKKEDPFLNIAPKKPNWDLKRDVQKKLDKLERRTQKALYKLMEEQEKQRQLADGNAVAED*

Click here to download the sequence:
Link to NCBI Protein BLAST