Transcript Information: S_Transcript_96032.p1


Annotated TAIR IDAT5G46400.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)AT PRP39-2, PRP39-2
Annotation TypeOrtholog
Chromosome Positionchr5:18820032-18824522 | Forward length=1036
E-Value1.1E-177
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.2462723813812
Replicate 24.8568256875758
Replicate 33.6822527675448
Condition 2: 8 Hour
Replicate 16.6232440916693
Replicate 26.3374178740523
Replicate 36.1837783154383
Condition 3: 24 Hour
Replicate 14.8647735418473
Replicate 24.2349613781741
Replicate 34.7560339705893


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_96032.p1 GENE.S_Transcript_96032~~S_Transcript_96032.p1 ORF type:complete len:1172 (+),score=297.01,TPR_11|PF13414.2|4e+03,TPR_11|PF13414.2|1.2e+03,TPR_11|PF13414.2|2.3,TPR_11|PF13414.2|0.013,TPR_14|PF13428.2|3.1e+02,TPR_14|PF13428.2|1.6e+04,TPR_14|PF13428.2|4.8,TPR_14|PF13428.2|1.6e+04,TPR_14|PF13428.2|1.2e+04,TPR_14|PF13428.2|7.8,TPR_14|PF13428.2|1.1e+03,TPR_14|PF13428.2|1e+04 S_Transcript_96032:90-3605(+)
ATGGCAGTTGGTTCTTCCGATGAGTTTGATGAACTTAGGTTTCATGAAGTGGTTGCTCAAGGCTCCTTGGACTTTGAAGCTTGGACTAGTCTCATCTCAACTGTTGAACATAATTATCATGATGACATAGATGAAATAAGTCTGGTGTATGACTCATTCTTGTCTGAGTTTCCTCTATGCTATGGTTATTGGAAGAAATATGCTGAGCACAAGGCACGTTTATGTAGTGGAGAAAGTGTTGCTCAAATCTTTGAACGAGCTGTTGAGTCAGCTCCGTACTCTGTTGGTGTATGGGTTGACTATTGCAACTTTGGAGTTTCATCCTTAGAGGATCCATCAGAAATTTTCAGATTATTTCAAAGAGGGCTCTCATTTATTGGGAGAGATTATCTGTGCTACAATTTATGGGATAAATGTATTGAATTTGAGTTTGCTCAGCAACATTGGAATTCCTTGGCAAACATCTATATCCAAACTTTAAAATTCCCAACAAAGAAATTGCATCAGTACTATGAAAGTTTCAAGAAATTGGTTGCCATTTGGGAAGAAGAGATAGGATTTCAGGGGAGTTCAAGCATTCATGAGCAATTAGCACATGACAAAGATGACAAGATTAAGACATACGAAGATACTGAAATCTCCCAGGTCATTAGTGACTTGCTTGATCCATCTGCTAGATCTGAAGCATTACTGAAGTATGTATCTATTGGAGAACAGTTTTATAGAAGAGCATGTGACTTGGATGCAAAAGTTCATAAGTTTGAGCAGAACATTCGTCGACCTTATTTTCATGTGAAGCCACTTGATGACAATCAACTACAGAATTGGCATAGCTACTTAGATCTTGTTGAGGAGGAAGATGATTTTGACTGGGCTGTGAAACTTTATGAAAGATGCTTAATCTCTTGTGCCAATTACCCTGAGTTCTGGATGCGCTATGTTGAATATGTGGAGTCTAAGGGAGGAAGAGAGATAGCTTTGGATGCTTTAGAGCGAGCAACCCACATCTTTTTAAAGAATGCACCTGAAATTCATCTTTACAATGCTTGGTATAAGGAGAAAAATGGGGATGTTGATGGTTTACATGCAGCATTTCAACAGTGTGACCAAGATTCTGAATCCTGTTTCATTGATATTGTTCGAAGGAAAGCTAATATGGAAAGACGCTTGGGAAACTATGTTGCGGCATATAAAGTTTACGAGGAGGCTCTTGATTTGGCTTCAGAAAAGAGACCTGACACACTTCCTATATTGTATGTGCATTTTGCGCGTCTTCAATACACGATCAAGAGCAATGTAGAGGCAGCCAGAGAGGTTTTGCTAAATGGTATTCAACGTGTGCCTCAATCCAAGGTACTCCTCAAGGAACTTGTACTCTTTGCATTGATGCATGAAGGAGCAATTGAAGTGGACACTGTAGATTCTATTATGGCTAAGGCTCTTGCCCTTGCATTGGATAATTCTGGTGGCATCAGAGAATGGGAGGAACTATCAAATTTATATCTAGAGTTTGTTGATTTATGTGGAAGCATTCACGATGTTAGGAGGGCGTGGAAGCGCCATTTAAAATTGTTTCCACACTTGCTCAGATTTCGGCCTTCACTTAAGAATCCTGCTAAAGCTGGTGTCTTTTGGAAGATGGTCAGAAAGGGGAGACCTGATGATGTTGACACTCACCCCCAAAACCCTTTGGAGAACCGTGGCGAAGAGACGCGTTTGCAAAAGGAGAAACCACTGGTAAATGAGAATGTTGACAAGTCTGAAGATGATATTTGCGGCCAGGAACAGTCTGAAGATGGTAATAGCAGTCCTAATGATTTGGAGCCGGTGCCTTCAGAGGTGATGAAGACACAGGGTGTATGTAAAGCAAATGAGCAGAGGGATCACATTTTACATGAATCAGCCGATGACAGAGACCCAATGGAGGTTAAGGGTTCCAAGTTAACTAACATTCAGCAAGAGCAGCAGGGGCAGGAGCAGGAGGGGAAACCAGGAGAAGTGCAGAGGTCTCGACAAGAAAAGCCACCTTCACGCTCTCAGAGACTAGACCCTCCTCGAAAAACTTCTCTTTCAAATGGAAGCAAAACTGTTAGTGGCCGCAATATTGTTGAAGGCCCCTCGGCATCTGGTGCCAGGAGTCCTGACAATAATGGTGCTGAAAGATGTAAAGAGTCTCCTGGTCCCTCCTCTACAATTGGCCACAAAAATTTCTCTCCTGAAGTTTCAGCTCGTCGTTCTTCAGACAGGGATGGAAACTGGCGCCGAAACCCTTCGAGTAGAGGTCGCTCAGATTTTTCTCCTAGCAATTCAGAAGAACGTTTGGAAAGGTCACTTTCTCCAAGAAGACGCAGTTCTCATGGGTATGTAGATGACCGGCGCCGTAGAGAGAGGTCTCTTTCTCCACGGCGTTACAGTTCTCGTTGGCAGTCAGAAGAACGTTGGCAGCGAGAGAGACGTCATCGTCGTTATAATCGGTATCAAGATAATTCACGTGGTCACAGAGATGTTAGGATGCAAAATCAAAGTCAAGTGGTTGTCGCCAATTCTGTGCAAATGCCAAATGCCCAACAACAGACTACGGGATTTGTATCTCAGACCCAACCTAATGTGCAGCCCATTACTTACACTCAAGCTCAGATAAACCAGTGTCCACCTCCTAGTAATGACCAATATGGGAATGTGCCAAATAGCCAGCTGTACAATCAAATGTGGCAACAATATTATTATTATAATCAGCAGCAGCAGCAGCAGACTCTCCTGCCACAGCAGCTACTTGTTCAGCAGCAACAACTTCAACAGATTCAACCTAATCAGCAGCTCCAGCAACAGGTGCAAAATCCAGCACAACAGCAAATACAAGCTCCTCAGTATCCGCAACAGATACAGCCGAATCAACAACAGCTTCTACACTTACAGTATCAGCATCAGCAGTTGTATCAGCTTTCGGAATTTCAGCAGCAAAACCAGCCGAAACAAACTAATGAAATGCCACAGTCTAAGGAGCAAGAATCACAGTTGCAGCTTCCACAACAGCAACTGCACCACCAGCTGCAGGTGCAGCAACAAGAGCAGCAACAACAGGCACAAAATCAGGTCCAACAACAACCTCAAGTCCAACAACAGGAGGATGTGGATGTGCAACGACAGCAGCAAGGATTTCAGTATCAGCAGCTTCAGCAACAACAATACTTACTCTACCTTCAGCAGCTGCAATATCAGCATACACAGTCACAGCAGCAGCCAGGACCAAGTCAAGACCAGCATTCATTGCAGCAACAGCCTTTTCCTGCAAAACAAGAGCAGCAAGAACATATACAAGAGCTGCAGCATACAGATGAAAAATCACGTTCACAGCCTTTGCAGGATGACGGTTCATCTCTAGTTGGTTCATGGAGCGGCAGTCAGTATCAACAGGATCGAGGAGTAGAATTTCGTCAGGCCTCTGCTTCTACTGAAGCTGCTACATTGCCTCAATCTCAAGAAGAGCTGCCTGAAATTGAAGGAACAGACGTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_96032.p1 GENE.S_Transcript_96032~~S_Transcript_96032.p1 ORF type:complete len:1172 (+),score=297.01,TPR_11|PF13414.2|4e+03,TPR_11|PF13414.2|1.2e+03,TPR_11|PF13414.2|2.3,TPR_11|PF13414.2|0.013,TPR_14|PF13428.2|3.1e+02,TPR_14|PF13428.2|1.6e+04,TPR_14|PF13428.2|4.8,TPR_14|PF13428.2|1.6e+04,TPR_14|PF13428.2|1.2e+04,TPR_14|PF13428.2|7.8,TPR_14|PF13428.2|1.1e+03,TPR_14|PF13428.2|1e+04 S_Transcript_96032:90-3605(+)
MAVGSSDEFDELRFHEVVAQGSLDFEAWTSLISTVEHNYHDDIDEISLVYDSFLSEFPLCYGYWKKYAEHKARLCSGESVAQIFERAVESAPYSVGVWVDYCNFGVSSLEDPSEIFRLFQRGLSFIGRDYLCYNLWDKCIEFEFAQQHWNSLANIYIQTLKFPTKKLHQYYESFKKLVAIWEEEIGFQGSSSIHEQLAHDKDDKIKTYEDTEISQVISDLLDPSARSEALLKYVSIGEQFYRRACDLDAKVHKFEQNIRRPYFHVKPLDDNQLQNWHSYLDLVEEEDDFDWAVKLYERCLISCANYPEFWMRYVEYVESKGGREIALDALERATHIFLKNAPEIHLYNAWYKEKNGDVDGLHAAFQQCDQDSESCFIDIVRRKANMERRLGNYVAAYKVYEEALDLASEKRPDTLPILYVHFARLQYTIKSNVEAAREVLLNGIQRVPQSKVLLKELVLFALMHEGAIEVDTVDSIMAKALALALDNSGGIREWEELSNLYLEFVDLCGSIHDVRRAWKRHLKLFPHLLRFRPSLKNPAKAGVFWKMVRKGRPDDVDTHPQNPLENRGEETRLQKEKPLVNENVDKSEDDICGQEQSEDGNSSPNDLEPVPSEVMKTQGVCKANEQRDHILHESADDRDPMEVKGSKLTNIQQEQQGQEQEGKPGEVQRSRQEKPPSRSQRLDPPRKTSLSNGSKTVSGRNIVEGPSASGARSPDNNGAERCKESPGPSSTIGHKNFSPEVSARRSSDRDGNWRRNPSSRGRSDFSPSNSEERLERSLSPRRRSSHGYVDDRRRRERSLSPRRYSSRWQSEERWQRERRHRRYNRYQDNSRGHRDVRMQNQSQVVVANSVQMPNAQQQTTGFVSQTQPNVQPITYTQAQINQCPPPSNDQYGNVPNSQLYNQMWQQYYYYNQQQQQQTLLPQQLLVQQQQLQQIQPNQQLQQQVQNPAQQQIQAPQYPQQIQPNQQQLLHLQYQHQQLYQLSEFQQQNQPKQTNEMPQSKEQESQLQLPQQQLHHQLQVQQQEQQQQAQNQVQQQPQVQQQEDVDVQRQQQGFQYQQLQQQQYLLYLQQLQYQHTQSQQQPGPSQDQHSLQQQPFPAKQEQQEHIQELQHTDEKSRSQPLQDDGSSLVGSWSGSQYQQDRGVEFRQASASTEAATLPQSQEELPEIEGTDV*

Click here to download the sequence:
Link to NCBI Protein BLAST