Transcript Information: S_Transcript_96155.p1


Annotated TAIR IDAT5G05800.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11290.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:1743234-1744751 | Reverse length=449
E-Value2.4E-40
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.1395478575878
Replicate 24.9028421238922
Replicate 34.9278210170467
Condition 2: 8 Hour
Replicate 110.042115017063
Replicate 29.2328264227443
Replicate 38.233105159596
Condition 3: 24 Hour
Replicate 15.9524417977016
Replicate 24.3768736642152
Replicate 36.3388735938784


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_96155.p1 GENE.S_Transcript_96155~~S_Transcript_96155.p1 ORF type:5prime_partial len:378 (+),score=84.46,Myb_DNA-bind_3|PF12776.3|5.6e-24 S_Transcript_96155:3-1136(+)
TTTCTCGATTTATGTGTAAAAGAGACATTAAATGGTAATAAGCCTGGACCATCTTTCAATAGAGATGGATGGAATAATGTTCTTGAAGCATTGAATAAGAAACCGAACTTCAACATTGACAAGAAACAGTTGAAGAACCACTGGGATTTAACTAGACAGAAATGGAAGGCCTGGTGCAAGCTACTAGGCACGAGCAACATGAAATGGGAACCTACTACTCAAAAATTTGGTGCTAGTCAAGAAGATTGGGCTAATTATATTAAGTTCAACCCTGAAGCTGCTATATTTCAATACAAGGAGCTTGAGTTTGTTGACAAATTGGAAATAGTTTTTCCCGGGATAACCCCTGCCACTGAAGCTGAAGTTACAGAACCTGCTGCTCAGCGTAGGAAACTTGATGACAGTCCCAGCAACTTGCTCTTGTGTACAGAGGACAGGGATAAAGAAGAATCACAAATATTGCCACCCGAGAGGATGGAGCAGTCTGAGACTTTGGAATTCAAGCCGAGATACATACAGCCCAAACGGATCGAGCATCGTTTTGAGGGTGTTGAATTAAGGCCAAGAGACTTGCAGCCCAAAAGGATTGATCATCTATATGAGGTTGTTGAACTGAGGCCTAAGGAAATACAACCAAAGAGGATTGAGCGCCTATGTGAGTCTGTTGAATTGTGTCCATTTGGCACACCACCTAAAAGGGTTGATCATCTATACGAGGCTGTTGAATTGAGGCCCAAGGACATTCAGCCAAAGAGTATTGAGCATGGACGTGAGCCCACTGAATTAAGTCCCTTGTACACACAGCCCAATGAGCTTGAGCGTCCATGTGATGCCCTCGAATCAAGGCATAGAGATGCACAGCCAGAGAAGGTTGACCAGCGTCAATGTGATACCGTGGAGTCAAGGAGTGCCATGACAATTCAATCTAAGGGGGGAGACAGAATTTACAGTATTGGTGAATGCATCGAGTGCTTGGATGGGATGGAGGACATAGAGCAAGGAGGCGAGCTTTACTTGTTTGCCTTGGACGTTTTCTTGAGAAAGGAATACAGGGAAATTTTTCTTCAACTTAAGAAGCCTGCTGTAAAGATTGCATGGTTGAAAAGGCTGCAATCAATAGGTTTCACCCCCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_96155.p1 GENE.S_Transcript_96155~~S_Transcript_96155.p1 ORF type:5prime_partial len:378 (+),score=84.46,Myb_DNA-bind_3|PF12776.3|5.6e-24 S_Transcript_96155:3-1136(+)
FLDLCVKETLNGNKPGPSFNRDGWNNVLEALNKKPNFNIDKKQLKNHWDLTRQKWKAWCKLLGTSNMKWEPTTQKFGASQEDWANYIKFNPEAAIFQYKELEFVDKLEIVFPGITPATEAEVTEPAAQRRKLDDSPSNLLLCTEDRDKEESQILPPERMEQSETLEFKPRYIQPKRIEHRFEGVELRPRDLQPKRIDHLYEVVELRPKEIQPKRIERLCESVELCPFGTPPKRVDHLYEAVELRPKDIQPKSIEHGREPTELSPLYTQPNELERPCDALESRHRDAQPEKVDQRQCDTVESRSAMTIQSKGGDRIYSIGECIECLDGMEDIEQGGELYLFALDVFLRKEYREIFLQLKKPAVKIAWLKRLQSIGFTP*

Click here to download the sequence:
Link to NCBI Protein BLAST