Transcript Information: S_Transcript_96379.p1


Annotated TAIR IDAT5G03990.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G51940.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:1075957-1077358 | Forward length=302
E-Value6E-32
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.7791421438561
Replicate 23.3800931076972
Replicate 30.82196038255601
Condition 2: 8 Hour
Replicate 12.7325012662622
Replicate 22.5550022123365
Replicate 34.0375421647318
Condition 3: 24 Hour
Replicate 10
Replicate 21.4519990703509
Replicate 31.9671789508169


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_96379.p1 GENE.S_Transcript_96379~~S_Transcript_96379.p1 ORF type:5prime_partial len:359 (+),score=54.40 S_Transcript_96379:3-1079(+)
CAATCGAAGTACATTGATAAGGTTCTCAAAAGGTTTAGTATCTCCGATTGCAAGCCCGTATCTACTCCACTAGCATCTCATTTTCAACTATCATCCGCTCAATGTCCCCAAGATGAAGAGTCCAAAAAGAAGATGTCCAATGTTCCCTATTCCAATGCCGTCGGGAGTCTTATGTATGCCATGATTTGTACCCGACCGGATTTGGCTCACGCCGTAAGTGTTGTTAGCCGATTCATGCACAATCCGGGCAAACAACATTGGGAAGCCGTGAAGTGGATACTTCGTTATTTAAAAGGTCGACAGCCATCTTCATGGGAGAAGAAATTCTGTGCTACTTCTGGAGTTCCATGGTACAAGGTTGTGGAGACTCAGAAGTATATGTGCCAGGATGACAAGGTTCTCAAGTGGAATGACTCTGCTGTCAAAGAGGCATTTATGGATGCAAAACAGCGGTTTTGGGCTGCAATGCACGGCCAGCCTTGTGACATAAAACTGCCTGATCCTGACATCTTCATTGATAAGATCGACTGGGATGCTATTGTTGACCCTGTGCTCCTCTCGGACTTGGAGAATAGAGAGTTCAATGTCAGTTACGAGACAGAGAAACAGGATGGCGGTGTAATTGGGATTCCTGTGATTCCTGAACAATATCTTCTGACCCCTAGTGGATGGGGGGATGCCGAAGAGGTGAATCCACAGACGAAGAATAACTGTGAACTAGGTGGTGGTAATGGATGGCATCAATGCGATGTGAATAATGAGAGCAAGGGACATAAGGGTTGGTCAAGTGGGTGGCGGGATCCTTATGATGATTATGTTTACGTGACTGAAAATAGGGCTGGTGGTCGAGACAATAGAGACAATGGATCAACATGGCATGGATACAACAAGAAGTGGGATCACGGCCTCAACAAGAACTGTGATAACAGAGGTTACAACACATCAAGGTACAAAATCTCTCGATTCCATCATAACATGAACAGCCATTCGATTGCTGATGACAATAAACACAACAGGGGCAATTTTGCTCACGAACGCCCCTTTACCAAGTGGAGACCTGTTTATAGGAAGTGGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_96379.p1 GENE.S_Transcript_96379~~S_Transcript_96379.p1 ORF type:5prime_partial len:359 (+),score=54.40 S_Transcript_96379:3-1079(+)
QSKYIDKVLKRFSISDCKPVSTPLASHFQLSSAQCPQDEESKKKMSNVPYSNAVGSLMYAMICTRPDLAHAVSVVSRFMHNPGKQHWEAVKWILRYLKGRQPSSWEKKFCATSGVPWYKVVETQKYMCQDDKVLKWNDSAVKEAFMDAKQRFWAAMHGQPCDIKLPDPDIFIDKIDWDAIVDPVLLSDLENREFNVSYETEKQDGGVIGIPVIPEQYLLTPSGWGDAEEVNPQTKNNCELGGGNGWHQCDVNNESKGHKGWSSGWRDPYDDYVYVTENRAGGRDNRDNGSTWHGYNKKWDHGLNKNCDNRGYNTSRYKISRFHHNMNSHSIADDNKHNRGNFAHERPFTKWRPVYRKW*

Click here to download the sequence:
Link to NCBI Protein BLAST