Transcript Information: S_Transcript_96400.p2


Annotated TAIR IDAT1G07910.1
Annotated Gene NameRNAligase
Annotated Gene Symbol(s)ATRNL, RNL, AtRLG1
Annotation TypeOrtholog
Chromosome Positionchr1:2446712-2454386 | Forward length=1104
E-Value2.1E-223
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 116.457235246583
Replicate 216.534412404023
Replicate 314.5846004891
Condition 2: 8 Hour
Replicate 122.403915804436
Replicate 221.034680675053
Replicate 319.698783303914
Condition 3: 24 Hour
Replicate 119.635286080051
Replicate 216.932732786926
Replicate 318.786074453466


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_96400.p2 GENE.S_Transcript_96400~~S_Transcript_96400.p2 ORF type:complete len:435 (+),score=91.97,tRNA_lig_CPD|PF08302.7|0.033,tRNA_lig_CPD|PF08302.7|0.0096 S_Transcript_96400:2305-3609(+)
ATGGAACCATTAACCCCACCTCCTAGCACAAAAGAAGCTATACAGAAAAAAGAAGGTCTTATTGTATTCTTTCCAGGGATACCAGGCTGTGCTAAGTCTGCACTTTGCAAGGAACTACTAAATGCCCCTGGTGGTTTTGGAGATGATCGTCCTATTCAAAGTCTAATGGGTGATCTCGTTAAAGGACGATACTGGCAGAAAGTTGCTGATGAATGCAAAAGAAAACGCAATTCTATAATGCTTGCTGACAAAAATGCGCCAAATGAGGAAGTTTGGAGACAGATTGAGAACATGTGTCAAACCACCAAGGCATCTGCTGTTCCAGTCATACCAGATTCTACAGGCTCTGATTCAAATCCTTTTTCATTGGATGCATTGGCTGTCTTTATGTTTCGTGTGCTTCAACGAGTTAATCATCCGGGAAATCTTGACAAGGCATCTCCAAATGCTGGCTTTGTATTACTAATGTTTTACCACCTTTATGAGGGCAAGAGCCGCAAAGAATTTGAAGCTGAACTAATTGAACGGTTTGGTTCACTTGCAAAGATGCCCTTGCTCAAACCAGAAAGCCCTTGTCTACCTGATTCTGTCAAATCAATGTTGGAAGAGGGGATCAACTTATACAGGCTACATAATAAGAGGCATGGGAGAACGGAATCAACCAAAGGGACATATGCAAATGAGTGGGCTAAATGGGAGAAGCAGATGCGGGAAACTTTATTGAGCAATGCTGATTACCTTGACTCAATTCAGGTTCCCTTTGAGACTGCAGTGAGCTCTGTTTTGGAGCAACTGAAAACTATTGCAAAAGGAAACTATATAGCCCCAAGTACTGAAAGGAAGAGGCTTGGTGCAATTGTTTTTGCTGCTGTTAGTCTGCCTGTGAGCGAAGTTCATGGGGTCATCAATGGCTTTGCTAAGGAGCACTCCAATGTCGAAGCTTTCTTCAAAGACAAGAATTTGGAAGATACCCTTAAAAGGGCTCATGTCACTCTTGCTCACAAACGAAGTCATGGTGTCACAGCAGTAGCTAATTACGGCCAGTACATGAACTGTAAAGTCCCTGTGAAGCTGACTGCATTACTGTTCTCCAATAAAATGGCAGCCTTTGAAGCACAATTTGGTTTAGTGGACGGTGAAATGATCATTTCGAAAAATGAGTGGCCGCATCTTACTGTGTGGACCGATGTTGGAATTCCTGCCAAGGAAGCAAATACGTTGCCAGGACTAGTCGCACAGGGTAAGGCTTCTCGTGTAGAAATTGATCCTCCTTTGACTGTGGCAGGAGAGGTGGAGTTCTTTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_96400.p2 GENE.S_Transcript_96400~~S_Transcript_96400.p2 ORF type:complete len:435 (+),score=91.97,tRNA_lig_CPD|PF08302.7|0.033,tRNA_lig_CPD|PF08302.7|0.0096 S_Transcript_96400:2305-3609(+)
MEPLTPPPSTKEAIQKKEGLIVFFPGIPGCAKSALCKELLNAPGGFGDDRPIQSLMGDLVKGRYWQKVADECKRKRNSIMLADKNAPNEEVWRQIENMCQTTKASAVPVIPDSTGSDSNPFSLDALAVFMFRVLQRVNHPGNLDKASPNAGFVLLMFYHLYEGKSRKEFEAELIERFGSLAKMPLLKPESPCLPDSVKSMLEEGINLYRLHNKRHGRTESTKGTYANEWAKWEKQMRETLLSNADYLDSIQVPFETAVSSVLEQLKTIAKGNYIAPSTERKRLGAIVFAAVSLPVSEVHGVINGFAKEHSNVEAFFKDKNLEDTLKRAHVTLAHKRSHGVTAVANYGQYMNCKVPVKLTALLFSNKMAAFEAQFGLVDGEMIISKNEWPHLTVWTDVGIPAKEANTLPGLVAQGKASRVEIDPPLTVAGEVEFF*

Click here to download the sequence:
Link to NCBI Protein BLAST