Transcript Information: S_Transcript_96403.p1


Annotated TAIR IDAT1G07910.1
Annotated Gene NameRNAligase
Annotated Gene Symbol(s)ATRNL, RNL, AtRLG1
Annotation TypeOrtholog
Chromosome Positionchr1:2446712-2454386 | Forward length=1104
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.83531994273
Replicate 26.2770190008704
Replicate 36.8835564255692
Condition 2: 8 Hour
Replicate 18.3499415607929
Replicate 28.9802491018621
Replicate 39.1267854534005
Condition 3: 24 Hour
Replicate 19.6302092007831
Replicate 26.7991434729042
Replicate 36.9982292222646


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_96403.p1 GENE.S_Transcript_96403~~S_Transcript_96403.p1 ORF type:complete len:710 (+),score=150.42 S_Transcript_96403:236-2365(+)
ATGCATCGCAACAACAACAAGCGCAGGGGTGCTAACCACAAAGAGGAAAAATGGAAAGTGAAGTCAACTCATGGAGAATCATCTTCTGCTGCTCAAGCTGCGTCAACAGATGGAGTCAAAGCTATCACCCAAAATCTTGGAGGAGTAAGCATTGCAGAACAGAGTGGGCAAGTGCATGATTCAGTTTCACCTGTTCAGATCGGGGGTGTTGTATTGCAAAACCAGACTGCTGCGTCTGGACAGAAGGCCATCTGGAAACCAAAGTCATATGGAACTTTGGCAGGTGAGTCAACGGCTCCTACAAATGAACTTTCTGCTGAGCAAAAAGGAGTTGAAGCAGGTCCACTTGTGAAGAATGACATCTCTTTGAGTAAATTATTCAGTGGAAAGCTGCTAGAGAATTTTACTGTTGACAACAACACTTATTCGCATGCCCAGATAAGGGCTACCTTCTACCCCAAATTTGAAAATGAGAAGTCTGATCAGGAGATACGGACAAGGATGATTGAAATGGTGTCCAATGGCCTGGCTACATTGGAGGTATCGCTTAAACACTCTGGGTCTTTATTCATGTATTCCGGGCACGAGGGCGGAGCATATGCAAAGAACAGTTTTGGGAATATTTACACTGCAGTTGGTGTATTTGTTCTTGGAAGGACATTACGTGAGGCGTGGGGTACTTTGGCTAGTCAAAAGCAGGCAGAGTTCAATGACTTTCTTGAGAGGAACCACATGTGCATATCAATGGAACTGGTAACTGCTGTTCTAGGTGATCATGGGCAGCGTCCTCGAGAAGATTATGCTGTTGTGACTGCTGTTACAGAACTGGGAGTTGGAAAACCGAAGTTTTACTCTACTCCCGAAATAATTGCCTTTTGTCGCAAATGGCGGTTGCCAACTAACCAGGTTTGGCTGTTCTCTACAAGGAAATCAGTGACATCGTTCTTTGCGGCTTATGATGCTTTATGTGAAGAAGGAACAGCGACACCTGTATGCCAGGCACTGGATGAAGTAGCAGATATCTGTATACCAGGATCAAAAGACCACATAAAGGTTCAAGGGGAAATTTTGGAAGGTCTTGTTGCTCGTATTGTGAGCCCAGAAAGCTCAAAACATATTCAGAAGGTTCTGAGGGATTATCCTCCTCCGCCAATAGATGGGGCTGAGCTTGACTTGGGACCAACTCTGCGAGAGATTTGTGCTGCAAATAGGAATGATGAGAAACAGCAAATAAAAGCAATTTTGAAGGAGATCGGCTCCTCGTTTTGTCCTGACTATGTTGATTGGCTAGGGAAAGAAGCAGGAGATGTCCATTCCAGGACCGCTGATAGATCCTTTGTCACAAAGTTTTTGCAAGCTCATCCAGCAGATTTTTCAACTCGCAAATTGCAGGAAATGATTCGCTTGATGAAAGAAAGGCGGTTTCCTGCTGCATTCAAGTGTTACTATAACTTGCACAAGGCCGACTCCATGTCCAATGACAATATATATTACAAGATGGTCATTCATGTGCACAGTGACTCAGCTTTCAGGCGATATCAGAAAGAGATGAGGCATGATCCTGGTCTCTGGCCATTATATAGAGGATTTTTTGTTGATATAAACTTGTTCAGAGAAAGCAAGGATAGAGTTGCTGAAGTTGGGAGAGACAGGACTGATACGAGAAATAAGGTTAATGGTAATGACGATGTCGCAGGAGTGGATTCACTTGCTGATGAAGACGCAAATTTGATGGTTAAATTGAAATTCCTCACATATAAGTTGCGAACTTTCTTGATCCGAAATGGTTTGTCGATCCTTTTCAAGGATGGCCCTACCTCTTATAGGACATATTATCTAAGACAAATGAAAATTTGGGGCACTTCAGCAGCAAAGCAAAAGGAACTGAGCAAGTTGCTCGATGAATGGGCTGTGCATATAAGAAGGAAGTGCGGCGGGAAACAGTTGGGTTCTGATATATACCTTAGTGAGGCGGAGCCTTTCCTTGAACAATATGCCAGACGAAGTCCTGCAAATCAAGCACTCATAGGTTCAGCTGGAAACGTGGTTAGATCTGAAGATTTCTTGGCCATTGTTGGAGATATATTGAAGAGGGTGACCTTCAGAGAGAACATGAAATGGAACCATTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_96403.p1 GENE.S_Transcript_96403~~S_Transcript_96403.p1 ORF type:complete len:710 (+),score=150.42 S_Transcript_96403:236-2365(+)
MHRNNNKRRGANHKEEKWKVKSTHGESSSAAQAASTDGVKAITQNLGGVSIAEQSGQVHDSVSPVQIGGVVLQNQTAASGQKAIWKPKSYGTLAGESTAPTNELSAEQKGVEAGPLVKNDISLSKLFSGKLLENFTVDNNTYSHAQIRATFYPKFENEKSDQEIRTRMIEMVSNGLATLEVSLKHSGSLFMYSGHEGGAYAKNSFGNIYTAVGVFVLGRTLREAWGTLASQKQAEFNDFLERNHMCISMELVTAVLGDHGQRPREDYAVVTAVTELGVGKPKFYSTPEIIAFCRKWRLPTNQVWLFSTRKSVTSFFAAYDALCEEGTATPVCQALDEVADICIPGSKDHIKVQGEILEGLVARIVSPESSKHIQKVLRDYPPPPIDGAELDLGPTLREICAANRNDEKQQIKAILKEIGSSFCPDYVDWLGKEAGDVHSRTADRSFVTKFLQAHPADFSTRKLQEMIRLMKERRFPAAFKCYYNLHKADSMSNDNIYYKMVIHVHSDSAFRRYQKEMRHDPGLWPLYRGFFVDINLFRESKDRVAEVGRDRTDTRNKVNGNDDVAGVDSLADEDANLMVKLKFLTYKLRTFLIRNGLSILFKDGPTSYRTYYLRQMKIWGTSAAKQKELSKLLDEWAVHIRRKCGGKQLGSDIYLSEAEPFLEQYARRSPANQALIGSAGNVVRSEDFLAIVGDILKRVTFRENMKWNH*

Click here to download the sequence:
Link to NCBI Protein BLAST