Transcript Information: S_Transcript_9668.p4


Annotated TAIR IDAT3G20475.1
Annotated Gene NameMUTS-Homologue 5
Annotated Gene Symbol(s)ATMSH5, MSH5
Annotation TypeOrtholog
Chromosome Positionchr3:7143546-7150811 | Forward length=807
E-Value1.3E-59
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.93378951702388
Replicate 20
Replicate 30.48533516009475
Condition 2: 8 Hour
Replicate 10
Replicate 20.58873285894017
Replicate 31.3088678353936
Condition 3: 24 Hour
Replicate 11.9162178500521
Replicate 21.1928321882288
Replicate 30.4424920071073


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_9668.p4 GENE.S_Transcript_9668~~S_Transcript_9668.p4 ORF type:3prime_partial len:114 (+),score=17.02,MutS_V|PF00488.17|4.5e-24 S_Transcript_9668:5340-5678(+)
ATGATAGATACCAATAAAATTTGTGTACTATATAATGTATATTTCCAGGTGGCCTTGATTGTTTTCCTCTCTCACATCGGGAGTTTCGTACCTGCCGATTCTGCTGTGGTAGGATTAACTGATAGGATATTTTGTGCAATGGGAAGCAAGCTTCTGACTGCTGAACAATCAACATTTATGATTGATCTACATCAAGTGGGTATGATGTTGAGGCAAGCTACTTCACGGTCCTTATGCCTCTTGGATGAATTTGGTAAAGGTACGCTGACAGAGGATGGCATTGGTCTTCTTGGTGGAACTGTGAATTATTTTGCGGCCAGTGATGATCCACCAAAGGTT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_9668.p4 GENE.S_Transcript_9668~~S_Transcript_9668.p4 ORF type:3prime_partial len:114 (+),score=17.02,MutS_V|PF00488.17|4.5e-24 S_Transcript_9668:5340-5678(+)
MIDTNKICVLYNVYFQVALIVFLSHIGSFVPADSAVVGLTDRIFCAMGSKLLTAEQSTFMIDLHQVGMMLRQATSRSLCLLDEFGKGTLTEDGIGLLGGTVNYFAASDDPPKV

Click here to download the sequence:
Link to NCBI Protein BLAST