Transcript Information: S_Transcript_96767.p1


Annotated TAIR IDAT1G09800.1
Annotated Gene NamePseudouridine synthase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:3177121-3180336 | Reverse length=372
E-Value2.5E-156
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 112.070377609399
Replicate 210.72999054983
Replicate 310.934627677982
Condition 2: 8 Hour
Replicate 114.100394690563
Replicate 213.203058213609
Replicate 313.336964758308
Condition 3: 24 Hour
Replicate 19.0721920507386
Replicate 211.765366665317
Replicate 38.1316973765128


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_96767.p1 GENE.S_Transcript_96767~~S_Transcript_96767.p1 ORF type:complete len:366 (+),score=79.16,PseudoU_synth_1|PF01416.16|3.9e-16,PseudoU_synth_1|PF01416.16|9e-13 S_Transcript_96767:227-1324(+)
ATGAGTTCTAAGCCCGGTTCCACTTCCCCACAACACTCAACGACGTCGTGTAACACCAGTTCCCAGTCGAAGCACTGCCTTGAGCAACGCTCAGAATCACCAGAGCAACGGCCTCTTAAGCTTGCAAAGATCGAAGAACAACAGCAGGAAGTAGAAGAGGAAGGAGAGAGTGTAAAAAAGAACATGAACCCAAGACCTGGAATGCAGAGATACTTAGTTGCAGTTGAGTACATTGGCACTAAATTCTCTGGGTCTCAGCAACAGCCTAATCAAAGAACTGTTATGGGTGTTCTCCAGGAAGCTTTTCACAAATTTGTTGGGCAACCAGTTTCAGTCTTTTGCTCGAGTCGAACTGATGCAGGAGTTCATTCCTTATCAAATGTTTGTCATGCAGATGTGGAACGGATTAGTAAGAGGAAACCAGGTGAAGTGTTGCCACCTCATGAGCCTTCAGTAGTTACAAGAGCTATAAACCATTTTTTACAGAAAGAGGGTGACATAATGGTCATTGATGTTCGAAGTGTTCCCTCTGATTTTCATGCCAGATACAAGGCCCTAGAGCGCACGTATTATTACCGCTTGTTGTCTGGTCCTGAGGCATTGTCAACATTTGAGAGAGACCGGGCATGGCATGTTCCTGAGGAGCTAAACATTCAAGCCATGCAGGAAGCATGCAAAGTTCTCATTGGACAGCATGATTTCAGTTCATTTAGGGCGGCTGGTTGTCAGGCCAACTCCCCTATCAGGACTTTAGATGAGCTTCATGTTTCTGAGACTACTTCCTCTCCACATATGCCATCCTTCACTAATGGGATGATTAATGAGCTCACTGATATCGGAAAAGAGACATCCAATGGATCTTGTCAGAAGTTTGGCTTTAGGAAAGGACACCGTTGCTTGGTAGTGAAAGCACGTGCACGCTCTTTTCTCTATCATCAGGTGAGGTTGCTTGTTGGCGTCCTGAAGTGTGTTGGCACAGGACACTTGACAGTTTCTGATGTGGAAAGAATCCTAAATGCTAGAGATGTGACAGCTGCTAGTCCTATGGCACCAGCCTGTGGTTTGTACCTTGGACTTGTGAAGTATGAATTGGACTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_96767.p1 GENE.S_Transcript_96767~~S_Transcript_96767.p1 ORF type:complete len:366 (+),score=79.16,PseudoU_synth_1|PF01416.16|3.9e-16,PseudoU_synth_1|PF01416.16|9e-13 S_Transcript_96767:227-1324(+)
MSSKPGSTSPQHSTTSCNTSSQSKHCLEQRSESPEQRPLKLAKIEEQQQEVEEEGESVKKNMNPRPGMQRYLVAVEYIGTKFSGSQQQPNQRTVMGVLQEAFHKFVGQPVSVFCSSRTDAGVHSLSNVCHADVERISKRKPGEVLPPHEPSVVTRAINHFLQKEGDIMVIDVRSVPSDFHARYKALERTYYYRLLSGPEALSTFERDRAWHVPEELNIQAMQEACKVLIGQHDFSSFRAAGCQANSPIRTLDELHVSETTSSPHMPSFTNGMINELTDIGKETSNGSCQKFGFRKGHRCLVVKARARSFLYHQVRLLVGVLKCVGTGHLTVSDVERILNARDVTAASPMAPACGLYLGLVKYELD*

Click here to download the sequence:
Link to NCBI Protein BLAST