Transcript Information: S_Transcript_9677.p1


Annotated TAIR IDAT3G20475.1
Annotated Gene NameMUTS-Homologue 5
Annotated Gene Symbol(s)ATMSH5, MSH5
Annotation TypeOrtholog
Chromosome Positionchr3:7143546-7150811 | Forward length=807
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.5752243721758
Replicate 22.9898172764856
Replicate 31.9247092174474
Condition 2: 8 Hour
Replicate 14.3846596913731
Replicate 25.2619145554497
Replicate 33.5858435223333
Condition 3: 24 Hour
Replicate 13.1984720375636
Replicate 22.3652264417683
Replicate 33.4965139440114


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_9677.p1 GENE.S_Transcript_9677~~S_Transcript_9677.p1 ORF type:complete len:642 (+),score=101.84,MutS_V|PF00488.17|5.2e-30,MutS_III|PF05192.14|5e-28 S_Transcript_9677:979-2904(+)
ATGTATATAGCATTCTTCATGATTTGTGTCCTCTCCATTTCATTTGGCAGAATTGGAGTTTCTTATTATGATTCGAGTGTCCGGCAACTAAGTGTACTTGAAGTTTGGGAGGATGGTGTAGACTATCCCTTAATTGATTTGATTAAGTATCAGGCACAGCCTCTGATCATCTACACCAGTACCAAAAGTGAAGAATCATTCTTGTCAGCTTTACAGAGAAGTGATGGAATAAATTTTGAGCCAACAGTGAAGCTTATGAAAAGTTCCACATTTAGTTATGAACAAGCTTGGCACAGATTGATTTATCTTAGAGTTTCAGGAATGGGTGATGGCTTAAGTGTCAAAGAGAGGATTAACTTTCTTAGTTCGATGATGTCTATCGAAAGTGAGGTTGAAGTTCGTGCTAGTGGGGGCCTTCTTGCAATATTGGAAAATGAAAGAATTGTTGACACCCTTGAACCAAAGGAATGGGAAGATGCATCAATTGCAATAGATTGTGTGACTGAGGTTTCACTAAACAAATTCCTCAAACTTGATGCAGCAGCTCATGAAGCATTGCAGATATTCCAAATAGACAAACATCCCAGCTCTATGGGTATTGGAAGATCGAAAGAAGGGTTTTCTGTCTTCGGAATGATGAATAAGTGTGTTACGCCAATGGGTCGACGTCTCTTGAGAAACTGGTTCCTAAGACCCATACTGGACCTGGGAATTCTGAACAGTCGGTTTGATGCTATATCGTTTTTCCTGTATTCTGAAGAACTGATGGTTTCATTACGGGGAACACTTAAATCTGTAAAAGATGTACCGTACATACTCAAGAAATTCAATTCCCCAAGCTCTTTGTGCACGAGCAATGACTGGACAGCTTTTTTGAAGAGCCTTTCTTCTCTCTTGCACCTGAACAAAATATTTGAAGTAGGCATTTCTGAGAGTCTGAGGGAGCAAGTCAGCCATTTCAATCTGGATTTTATTGACAAGGCAGCTACTTGCATTACAACGGAGCTGTCTTATATCTATGAACTGGTTATTGGTGTCATCGATGTAACTAGAATAAAAGAAAAAGGTTACGAATCAATCATTAAAGAGGGTTTCTGTGAAGAGCTGGATGAACTCAGACAAATATATGAGGAACTACCAGAACTTCTGGAAGAGGTCTCATCACTGGAGCTTGCAAGGCTTCCACATTTATGTAGAGAAAAACATGTTCCTTCTATCGTTTACTTACATCAAATAGGATACTTGTTGTGCATCTTTGAAGAAAAACTTGATGAGTCCATACTACAAGCTCTTGAAGATGTTGAATTTGCTTTTTCTGATGGTGATAGTGAGCCAAGAAGATTTTTCTATCGTACATCAAAGACAAGAGAGTTGGACAACCTTCTCGGAGATATATATCACAAAATTCTGGACATGGAGAGGGCAATTACAAGGGATTTGATATCTCATATTCTCATGTTTTCAACACATTTGCTGAAGGCTGTGAGCTTTGCAGCAGAACTTGACTGCCTTTTGTCTTTGGCATTGGTTGCTCGTCAAAACAATTACGTAAGACCCATTCTGACTACCGATACTGTACTTGATATACAGAATGGAAGGCACATTTTGCAGGAAATGACAGTGGACACATTCATCCCGAATGACACAAAAATACTTGATGATGGAAGAATCAATATCATCACTGGTCCAAACTATTCTGGAAAAAGCATCTATATAAAACAGGTGGCCTTGATTGTTTTCCTCTCTCACATCGGGAGTTTCGTACCTGCCGATTCTGCTGTGGTAGGATTAACTGATAGGATATTTTGTGCAATGGGAAGCAAGCTTCTGACTGCTGAACAATCAACATTTATGATTGATCTACATCAAGTGGGTATGATGTTGAGGTATATGCGAATAGGAGCTGGAGGGAGTAGTGTGTCGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_9677.p1 GENE.S_Transcript_9677~~S_Transcript_9677.p1 ORF type:complete len:642 (+),score=101.84,MutS_V|PF00488.17|5.2e-30,MutS_III|PF05192.14|5e-28 S_Transcript_9677:979-2904(+)
MYIAFFMICVLSISFGRIGVSYYDSSVRQLSVLEVWEDGVDYPLIDLIKYQAQPLIIYTSTKSEESFLSALQRSDGINFEPTVKLMKSSTFSYEQAWHRLIYLRVSGMGDGLSVKERINFLSSMMSIESEVEVRASGGLLAILENERIVDTLEPKEWEDASIAIDCVTEVSLNKFLKLDAAAHEALQIFQIDKHPSSMGIGRSKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLGILNSRFDAISFFLYSEELMVSLRGTLKSVKDVPYILKKFNSPSSLCTSNDWTAFLKSLSSLLHLNKIFEVGISESLREQVSHFNLDFIDKAATCITTELSYIYELVIGVIDVTRIKEKGYESIIKEGFCEELDELRQIYEELPELLEEVSSLELARLPHLCREKHVPSIVYLHQIGYLLCIFEEKLDESILQALEDVEFAFSDGDSEPRRFFYRTSKTRELDNLLGDIYHKILDMERAITRDLISHILMFSTHLLKAVSFAAELDCLLSLALVARQNNYVRPILTTDTVLDIQNGRHILQEMTVDTFIPNDTKILDDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADSAVVGLTDRIFCAMGSKLLTAEQSTFMIDLHQVGMMLRYMRIGAGGSSVS*

Click here to download the sequence:
Link to NCBI Protein BLAST