Transcript Information: S_Transcript_9679.p4


Annotated TAIR IDAT3G20475.1
Annotated Gene NameMUTS-Homologue 5
Annotated Gene Symbol(s)ATMSH5, MSH5
Annotation TypeOrtholog
Chromosome Positionchr3:7143546-7150811 | Forward length=807
E-Value8.4E-47
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.92566960818019
Replicate 20.95925171989195
Replicate 30.9622297087096
Condition 2: 8 Hour
Replicate 13.1524490034023
Replicate 23.5016806566529
Replicate 32.5949727519108
Condition 3: 24 Hour
Replicate 11.8995550861386
Replicate 20.78830648961208
Replicate 32.4125433778807


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_9679.p4 GENE.S_Transcript_9679~~S_Transcript_9679.p4 ORF type:complete len:115 (+),score=5.74,MutS_V|PF00488.17|3.8e-21 S_Transcript_9679:4372-4716(+)
ATGATAGATACCAATAAAATTTGTGTACTATATAATGTATATTTCCAGGTGGCCTTGATTGTTTTCCTCTCTCACATCGGGAGTTTCGTACCTGCCGATTCTGCTGTGGTAGGATTAACTGATAGGATATTTTGTGCAATGGGAAGCAAGCTTCTGACTGCTGAACAATCAACATTTATGATTGATCTACATCAAGTGGGTATGATGTTGAGGCAAGCTACTTCACGGTCCTTATGCCTCTTGGATGAATTTGGTAAAGGTACGCTGACAGAGGGTAAGTGTTTCTGTCCTTGCTCAAAATTCTCCTTTCCTATCCCCTTGCATATATGCTATAATACTCTGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_9679.p4 GENE.S_Transcript_9679~~S_Transcript_9679.p4 ORF type:complete len:115 (+),score=5.74,MutS_V|PF00488.17|3.8e-21 S_Transcript_9679:4372-4716(+)
MIDTNKICVLYNVYFQVALIVFLSHIGSFVPADSAVVGLTDRIFCAMGSKLLTAEQSTFMIDLHQVGMMLRQATSRSLCLLDEFGKGTLTEGKCFCPCSKFSFPIPLHICYNTL*

Click here to download the sequence:
Link to NCBI Protein BLAST