Transcript Information: S_Transcript_97008.p1


Annotated TAIR IDAT5G41580.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:16626563-16630659 | Reverse length=760
E-Value1.2E-128
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.9829782647461
Replicate 24.7079592779634
Replicate 34.8035996703102
Condition 2: 8 Hour
Replicate 16.0451681756726
Replicate 26.4120151959049
Replicate 36.3546198403972
Condition 3: 24 Hour
Replicate 15.3469693899571
Replicate 25.0732799972158
Replicate 35.0918980859701


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_97008.p1 GENE.S_Transcript_97008~~S_Transcript_97008.p1 ORF type:5prime_partial len:956 (+),score=139.65,zf-MIZ|PF02891.16|1.1e-20 S_Transcript_97008:3-2870(+)
ACGAGTGCCCAATATCATAAGAGAGGGAGTGCATGTATCGGCCTTGGAGTCGGTCACACCTTTCCATTTTACAAATTACTCAATCAAAGGCGCAGCGCAACAAAGACGAGGAAACAGGTGAAACTGAAAATCCCGATTTCCATCCCACTTCTTTTTACAAGTTTTAACCCCTTGAGGAGCCTTCAGACACCAAGGAAACACAAAATGAACGGTGCAATGGTAACTCCATCACCGTCAATGTTGAATACCACCAGCCGTGGCGGTGGCGGCGGTGGCGGTGGCGAAGTTCGAACATTACAACCGGAATCGGCCCTTAACTCCGCTCGAGTAGTCGTTGTGGCCCAGAAAATAGCTGATTACGACAAGACATGTGGCAATACTTTTGACTCTTCATATTACTCTCAGCTCTGTATTTCTCTTGCCAGGGGATTAGACTATGGAGTTGCAATCAACGATGTCCCTGACCAAGCTTCAACTCTGCCACCAATTTTGAAACAGGTGTGTCGCCGAAAAGATATATTCTCTGTGCGAGCAGCTATCATGGTGCTTATGATCTCAGTGAAGAATGCGTGCAAGTTGGGATGGTTCTTTGCCAAGGATAATGAAGAACTTCTAAAGCTTGCAGATGAGGTTGGTAGCTATTTTGGTGCTAACACATTACTGAACAATGAAGTAACTAGTATTCTGCCAACTGTTTCCAGCATAATGGCAAGATTCTATCCTCGGTTAAAGCTAGGTCACATAATTACAGCTCTTGAAGTTAATCCAGGATATGGGACTTATGCGGTTGATTTTCATATCTCAAAGAATATATCATATTCTGCAAGGGAAAAAATTAGATTATTCATAACTATGAAGGACAATATGGACACATCTTCTTGCATCATTAATCCCCAGCATGCGAACCTCTTGCTCAATGGAAGGGGAGTGGATCGTAGAACTAATCTCTTCATGGATCAAGGGCCTCAGCTTCCAACCATTGTCAATCAATTGCTTAAATACGGAACGAATCTGCTTCAAGCTGTCGGTCAATTTAATGGTCACTACATTATTCTCATTGCTTTCATGAGCATTGTACCGACTTCTGCCCTCCCAGCTCCGCGAGATTATGTGCAGCCTGAAACTGTTGCATCAAGTTCAGGGATAGATTCTGAGATTATTGAAGGACCATCACGTATTCGTCTCAATTGCCCTATAAGTTATCGACGCATTAGAATACCTGTGAAAGGACATTTGTGCAAGCATTATCAATGTTTCGACTTGAACAACTTTGTGGAGATCAATTCAAAACGACCATCCTGGCGGTGTCCTCATTGCAATCAATCTATCTGTTTCACTGATATACGTGTTGATCAAAATATGGTCAAGATTCTGAAGGAGGCAGGCGAAGATGTTTCAGAGGTGATGATTGATGCTGATGGTTCGTGGACAGCTGCTTCCAGCAGTAACTGTAAAGATGACTCACGAGACAAAAACCCAGCTAGCCAACAGGAAGGGCCTCATCCTCATGATTCTTCTGTTTCTGGACAGCTATTAAATGTTTCATCCAATGTGTGTGATCTCACCAAAGATGATGAAATGGACACAATAGATAGATTTGAACCTGTGGATATGAAACCTATAATCAATCAAAGCGTTCAGGCTCAATGTTTTCAAACTAACGCAACACAACCACCTACTCCCAGGTGCACCAATAATTCCCCACATCATGCAAATGGTCGTTCGACTGGATCTTTGTTGTATGATTATGGTGCTGTAAGTTATAACTTGAGATCTGAAGCTTATGACATAGGTGGCATTTCTAGGGCTCCAACAGGTAATTTCGGTTTATCTCCTGTGTTGACTGATGCTGTTACCCCTGCACTGAGTCAGCAGCCTGATCACTTCCACGGGACCAACTTTCCAACAAGTTCTACTGCACTTGGTCAATTTGCTGCTTCAAATAGTTTACAAATACAGGAGGCGCTGCTGTCAACTATGAGCAATGACCTTAACCAGACTCATATGATACCTAGAAATGTAACCAGAACTCCATCAGCTATTCAGGCCCTTCCAGTTCAGATGCCTTCACCAACTGTGCAGCAGCATTCAAGGCCTGCGATGGGCATGCCTGGTACAAGTGGGTCCTCTGCTCCTTTCCAGATGCCTATTCAAACCAATGCTCATATTTCTAGTACTGTTGGCAGCAACATGGAAAGGCAGCGACACCAACAGCAAGCCAGCATCAACCCTTTGATTGTGTCAAACTTGGCCATGACTTCAGTACAGAATAGATCAACTCAGGTGGCCGGTGTTCCTAGTCCTAACTTGGGTAGGATTCCACAAACATTGAGCCAGCCTCCACATTTGGCGCGGTCTTCCCGTGGTCCTATTCAGCAAGGAGTCTCCCCAAGCATGGTTGTCAACAGACCTAGCTCTGTCCAACCTGTCCAGCTTAATAGGCCAGGTGCTCAAACGAGACAGCCGCAATCAATGCCTATACAAACTCAGTCGGCCAGAGTGGCATCGTCCTTGCCTTTGACAGCGGGAACCATGCCTCAGGCTGTCACAAGGACTGAAAATTTGATCGATTTGCAATCAGAGAAGAACTGGCAACCTACAGGCCGAATGCGAGGAAGCCTCCAGGGTTCAGCTCGCGATGCTGCTATGAACCAATTTATGGGTCAGCCCAATCAGCCATCCCAGGCTCCTAGCCCTAGACCGTCTGTCTCAGGAGCATCTCCATTATCAACTCATCTTCAGGCTCTGCTGTCAAATAGAATGAATTTGAATGCTCCTCGAGGGCAGAATCAACCATCGAATGATGGAGCACCTTCCTGTGGTAATGCATTTACCCAACCAGAGCAATCTCGAGGTAAATTAATTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_97008.p1 GENE.S_Transcript_97008~~S_Transcript_97008.p1 ORF type:5prime_partial len:956 (+),score=139.65,zf-MIZ|PF02891.16|1.1e-20 S_Transcript_97008:3-2870(+)
TSAQYHKRGSACIGLGVGHTFPFYKLLNQRRSATKTRKQVKLKIPISIPLLFTSFNPLRSLQTPRKHKMNGAMVTPSPSMLNTTSRGGGGGGGGEVRTLQPESALNSARVVVVAQKIADYDKTCGNTFDSSYYSQLCISLARGLDYGVAINDVPDQASTLPPILKQVCRRKDIFSVRAAIMVLMISVKNACKLGWFFAKDNEELLKLADEVGSYFGANTLLNNEVTSILPTVSSIMARFYPRLKLGHIITALEVNPGYGTYAVDFHISKNISYSAREKIRLFITMKDNMDTSSCIINPQHANLLLNGRGVDRRTNLFMDQGPQLPTIVNQLLKYGTNLLQAVGQFNGHYIILIAFMSIVPTSALPAPRDYVQPETVASSSGIDSEIIEGPSRIRLNCPISYRRIRIPVKGHLCKHYQCFDLNNFVEINSKRPSWRCPHCNQSICFTDIRVDQNMVKILKEAGEDVSEVMIDADGSWTAASSSNCKDDSRDKNPASQQEGPHPHDSSVSGQLLNVSSNVCDLTKDDEMDTIDRFEPVDMKPIINQSVQAQCFQTNATQPPTPRCTNNSPHHANGRSTGSLLYDYGAVSYNLRSEAYDIGGISRAPTGNFGLSPVLTDAVTPALSQQPDHFHGTNFPTSSTALGQFAASNSLQIQEALLSTMSNDLNQTHMIPRNVTRTPSAIQALPVQMPSPTVQQHSRPAMGMPGTSGSSAPFQMPIQTNAHISSTVGSNMERQRHQQQASINPLIVSNLAMTSVQNRSTQVAGVPSPNLGRIPQTLSQPPHLARSSRGPIQQGVSPSMVVNRPSSVQPVQLNRPGAQTRQPQSMPIQTQSARVASSLPLTAGTMPQAVTRTENLIDLQSEKNWQPTGRMRGSLQGSARDAAMNQFMGQPNQPSQAPSPRPSVSGASPLSTHLQALLSNRMNLNAPRGQNQPSNDGAPSCGNAFTQPEQSRGKLI*

Click here to download the sequence:
Link to NCBI Protein BLAST