Transcript Information: S_Transcript_9705.p1


Annotated TAIR IDAT1G24310.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: nucleolus; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; Has 2922 Blast hits to 2454 proteins in 263 species: Archae - 0; Bacteria - 57; Metazoa - 1043; Fungi - 654; Plants - 388; Viruses - 11; Other Eukaryotes - 769 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:8624192-8626179 | Forward length=377
E-Value2.4E-155
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.7243723057479
Replicate 28.2051696701501
Replicate 39.4499970015143
Condition 2: 8 Hour
Replicate 111.220797659979
Replicate 210.107391671943
Replicate 313.44718760755
Condition 3: 24 Hour
Replicate 14.7541206494681
Replicate 27.1175606603405
Replicate 35.7670239273406


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_9705.p1 GENE.S_Transcript_9705~~S_Transcript_9705.p1 ORF type:complete len:363 (+),score=87.53,Nup54|PF13874.2|1.6e+04,Nup54|PF13874.2|2e-30,Nup54|PF13874.2|5.2e+03 S_Transcript_9705:177-1265(+)
ATGATGCAACCAGGACCAGCCATGGCAGCTCCACAACCTCCAATAGATCAACAACAACATTATCAACAACATCAGATGTGGCCTCAGCAACCACAACAACAACCTCATCCTCAGATGTGGCCTCAACAACAACAACAACAACAGCAAACGTCGCCGTTTCAACCTAGCACTGGATTCGGTTTCCAAACGACGCCGTTCGGCTCTCAACAACAACAACAGCAACAACCACAACAACAGCAACCACAAATGACGCCGCTTCCTGGTGTTGCTCAGCAACAGCTCACCACTCAGATGGCTCCTGTCGCTCCTTTGCCTTTCTCCCTCGCTGAGCGTGACATTCAAGCTATTGTTGATGCGTACAAGGACGAGCTTGGTAATCCGAAGTATGCTTTCAAGCATTTGTTATTTAGCGTAACTGAACCCCAATTTCGGATCAAGCCAGCTGGTGTATCAGATATAATGTGGGCTGAAGCAATGGGGAAACTTGAGGGAATGGATAATGCAAATCGTGAGCGATTGTGGCCTCAGCTTGTAAAAGGTTTTAAGGATCTTTCACACCGTTTAAAGCTTCAAGATGAAGTCATTGTTTCAGATGGCGAGAGATTGCGAATGACCCAAAGCAATGTGAAGACGCTTCAAAGGCACTTCCAAGCTGACACTCTACCTCGAATTGAAAGGTTGAGACAGAAAGAGCAAGGTCTTCAACGACGTTTGCTGAGGGTGATGAGAATCGTAGAGGCTCTGGAGGGAAAAGGTTGCAGATTACCACTTATGAAAGGGGAAGTTGAATTGGCTGAGAAGTTGGCTGCTATCATTAGACAGCTTAAAGGGTCTGGGGCAGAACTTTCAAGAAGAGTCCAAAATCTGCTGACTGTATCTCGTGTTCAGGCAAATGCCAGTGGTGGTAGTGTCTCCATTTATCTTCCAGGTTCAACAAAAATACATGAGCGAAGTCTTGCCGACATGCAGGAGGTTCTGCAGCAGCAGACTGGGGCAATAGCAAGACTTGGCAATGTGTTGAAGAGAGACGTTAGGGACATGGAGATTATAATGGCTGAAGACACTGAAATGATTGAAGATGGTAGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_9705.p1 GENE.S_Transcript_9705~~S_Transcript_9705.p1 ORF type:complete len:363 (+),score=87.53,Nup54|PF13874.2|1.6e+04,Nup54|PF13874.2|2e-30,Nup54|PF13874.2|5.2e+03 S_Transcript_9705:177-1265(+)
MMQPGPAMAAPQPPIDQQQHYQQHQMWPQQPQQQPHPQMWPQQQQQQQQTSPFQPSTGFGFQTTPFGSQQQQQQQPQQQQPQMTPLPGVAQQQLTTQMAPVAPLPFSLAERDIQAIVDAYKDELGNPKYAFKHLLFSVTEPQFRIKPAGVSDIMWAEAMGKLEGMDNANRERLWPQLVKGFKDLSHRLKLQDEVIVSDGERLRMTQSNVKTLQRHFQADTLPRIERLRQKEQGLQRRLLRVMRIVEALEGKGCRLPLMKGEVELAEKLAAIIRQLKGSGAELSRRVQNLLTVSRVQANASGGSVSIYLPGSTKIHERSLADMQEVLQQQTGAIARLGNVLKRDVRDMEIIMAEDTEMIEDGS*

Click here to download the sequence:
Link to NCBI Protein BLAST