Transcript Information: S_Transcript_97092.p1


Annotated TAIR IDAT5G28840.1
Annotated Gene NameGDP-D-mannose 3',5'-epimerase
Annotated Gene Symbol(s)GME
Annotation TypeOrtholog
Chromosome Positionchr5:10862472-10864024 | Reverse length=377
E-Value2E-269
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1206.07474765972
Replicate 2201.95040176985
Replicate 3223.16686467299
Condition 2: 8 Hour
Replicate 1157.11960855348
Replicate 2159.3254405771
Replicate 3160.09442156228
Condition 3: 24 Hour
Replicate 1173.14092840693
Replicate 2179.09207719193
Replicate 3190.56655772754


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_97092.p1 GENE.S_Transcript_97092~~S_Transcript_97092.p1 ORF type:complete len:378 (+),score=92.89,Epimerase|PF01370.17|6.1e-48,GDP_Man_Dehyd|PF16363.1|3.7e-30,3Beta_HSD|PF01073.15|3.7e-10,NAD_binding_4|PF07993.8|2.3,NAD_binding_4|PF07993.8|0.00012,NAD_binding_4|PF07993.8|2.9e+03 S_Transcript_97092:432-1565(+)
ATGGGGAGTAATGACGGAAATGATTATGGTGCTTACACTTATGACAAGCTTGAGAGGGAGCCATACTGGCCATCACAAAAGCTGAGAATATCGGTCACTGGGGCCGGAGGTTTCATTGGGTCCCACCTTGCTCGGCGTCTGAAAAGGGAAGGCCACTATGTCATTGCTTCTGACTGGAAGAGAAATGAGCACATGACTGAGGACATGTTTTGTGATGAATTCCATCTTGTTGATCTTAGGGTTATGGAGAATTGTTTGAAGGTCACCAAAGATGTTGATCATGTCTTTAACCTTGCTGCTGATATGGGTGGCATGGGCTTCATCCAGTCAAATCACTCTGTCATTATGTACAACAACACAATGATCAGTTTCAACATGCTTGAGGCTGCCAGAATTAATGGTGTTAAAAGGTTCTTTTATGCCTCAAGTGCGTGCATTTATCCTGAATTTAAGCAGTTGGAAACTACGAGTGTGAGTCTTAAGGAGTCTGATGCCTGGCCTGCAGAGCCCCAAGATGCTTATGGCTTGGAAAAACTTGCTACTGAGGAGTTGTGCAAGCATTACACCAAAGACTTTGGAATTGAATGCAGAATTGGAAGGTTTCACAACATTTACGGTCCTTTTGGTACCTGGAAAGGTGGTAGAGAAAAGGCTCCGGCTGCTTTTTGCAGAAAGGCTATTACTTCAACTGATAAATTTGAGATGTGGGGAGATGGACTGCAGACTCGATCTTTCACATTCATTGATGAATGTGTGGAAGGTGTACTTCGATTGACCAAGTCGGATTTTCGGGAGCCTGTGAACATTGGAAGTGATGAGATGGTTAGTATGAATGAGATGGCTGAGATCGTTTTGAGCTTTGACGAAAAAAAGCTTCCTATCCATCATATTCCTGGCCCTGAGGGTGTTCGTGGCCGTAACTCGGACAACACACTGATTAAAGAGAAACTTGGCTGGGCCCCAACCATGAGATTGAAGGATGGGCTTCGGATTACATACGCGTGGATCAAGGATCAGATTGAGAAAGAAAAGTCTCAAGGCATGGACCTGTCAGTTTATGGTTCCTCAAAGGTGGTGGGCACACAAGCTCCGGTTCAGTTGGGTTCACTACGTGCTGCGGATGGCAAGGAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_97092.p1 GENE.S_Transcript_97092~~S_Transcript_97092.p1 ORF type:complete len:378 (+),score=92.89,Epimerase|PF01370.17|6.1e-48,GDP_Man_Dehyd|PF16363.1|3.7e-30,3Beta_HSD|PF01073.15|3.7e-10,NAD_binding_4|PF07993.8|2.3,NAD_binding_4|PF07993.8|0.00012,NAD_binding_4|PF07993.8|2.9e+03 S_Transcript_97092:432-1565(+)
MGSNDGNDYGAYTYDKLEREPYWPSQKLRISVTGAGGFIGSHLARRLKREGHYVIASDWKRNEHMTEDMFCDEFHLVDLRVMENCLKVTKDVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEAARINGVKRFFYASSACIYPEFKQLETTSVSLKESDAWPAEPQDAYGLEKLATEELCKHYTKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAITSTDKFEMWGDGLQTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEIVLSFDEKKLPIHHIPGPEGVRGRNSDNTLIKEKLGWAPTMRLKDGLRITYAWIKDQIEKEKSQGMDLSVYGSSKVVGTQAPVQLGSLRAADGKE*

Click here to download the sequence:
Link to NCBI Protein BLAST