Transcript Information: S_Transcript_97235.p1


Annotated TAIR IDAT4G15850.1
Annotated Gene NameRNA helicase 1
Annotated Gene Symbol(s)ATRH1, RH1
Annotation TypeOrtholog
Chromosome Positionchr4:9001426-9004534 | Forward length=522
E-Value7.1E-250
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.8200811485683
Replicate 24.676121100822
Replicate 34.0510056137388
Condition 2: 8 Hour
Replicate 14.7252791646827
Replicate 25.301998810571
Replicate 34.5999516989555
Condition 3: 24 Hour
Replicate 13.1567750708951
Replicate 23.275117279819
Replicate 33.5962067167218


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_97235.p1 GENE.S_Transcript_97235~~S_Transcript_97235.p1 ORF type:complete len:519 (+),score=102.21,DEAD|PF00270.25|5.7e-33,DEAD|PF00270.25|6e+03,Helicase_C|PF00271.27|7.6e-22,ResIII|PF04851.11|1.1e-07,ResIII|PF04851.11|4.2e+03 S_Transcript_97235:221-1777(+)
ATGGGTGAAACACAGCCCAAAGCTCAAAAGAATATACCGGTGCTTCCATGGATGCGGAACCCAGTTGACATTAGCGCCATTGAGGAATGCCGTCTCCCTCTCCTCCCTCGCCTTGATCCCAGATTAGATGAAGCTCTGAAGACTATGGGGATCTCTTCATTGTTCCCAGTTCAAGTTGCAGTTTGGCAAGAGACAATTGGTCCTGGTGCTTTTGAGCGAGACCTATGTATAAATTCACCGACTGGAAGTGGGAAAACATTGGCATATGCTCTACCTATTGTACAAACCCTAGCAAGTTGCTCAGTGAAATGTCTACGTGCTTTAGTGGTCTTACCCACTCGTGATTTAGCTTTACAGGTTAAAGACGTCTTTGCTGCCATTGCTCCAGCTGTGGGCTTGTCTGTTGGTTTGGCTGTCGGACAGTCTTCAATTGCTGATGAAATATCTGCATTAATTAAGAGACCTAGACTTGAGGCTGGGTGCTGTTATGACCCTGATGATCGTGCTGAGAGATTACAAAGTGCAGTAGACATACTGGTGGCGACTCCTGGGAGACTTATGGACCATATTAATACCACCAAGGGCTTCACACTCGAGCATCTACGATATCTTGTAGTTGATGAAACAGATCGGTTGCTGAGGGAGGCTTATCAGTCTTGGTTGCCTACTGTGCTTAAGTTGGCCCAACCTAGCTATGATGTATTTGCACCCCATCCCCAAAATTTTTCCACATTAATTTCTAGTTCCTTCAAAACAATTAGGAGATTTGGAGTTGAAAGAGGATTTAAGGGGAAAGCTCAACCTAGGCTTGTGAAGATGGTTCTTTCTGCGACACTGACACAAGATCCTAGCAAGCTTGCTCAGCTTGATCTTCATCACCCTCTTTTTTTGACCACTGGCCAAACACGTTATCAGTTTCCTGAAAAGCTTGAGTCCTACAAAGTGATTTGTGAATCGGAAGACAAACCAGTATATCTGGTAGCCCTTCTTCAGCAGTTGAAGGGTGAGAAAAGCATTGTCTTTACATCTTCTGTACAATCAACCCATTGGTTATGCAGCTTGCTGAAATTTTTTGGTGATCTGAATATTAAGATCAAGGAGTACTCAGGTTTGCAACGACAAGCTTTAAGAAGCAAAACATTGAAGGCATTCCGGAAAGGGGATGTAGACGTGCTTGTTTGTTCTGATGCTATGACCAGAGGGATGGATGTTGAAGGGGTGAAAAATGTAATCAATTATGATGTCCCACCTTATATCAAGACACATATTCATCGAGCTGGACGGACAGCGAGAGCGGGTCAAGCTGGGCGCTGCTTCACTTTGCTACGGACAGATGAAATGAAGCGATTCAAGAAACTGCTGCGTAAAGCAGAGGGCAGTTCCTGTAAAGCCTACACCCTTCCATCCGACTCAATCAAATCACTTCAATCTGTTTATGTAACTGCATTTGATAAACTGAAAGAGAGTATTCAGTCTGAAGCACCTCGAAGACGGAAGTTTGATTTCAAGCCTTCCGGACCTGGCAGAGGAAAGGGCACACACAAGTCCAAGAATTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_97235.p1 GENE.S_Transcript_97235~~S_Transcript_97235.p1 ORF type:complete len:519 (+),score=102.21,DEAD|PF00270.25|5.7e-33,DEAD|PF00270.25|6e+03,Helicase_C|PF00271.27|7.6e-22,ResIII|PF04851.11|1.1e-07,ResIII|PF04851.11|4.2e+03 S_Transcript_97235:221-1777(+)
MGETQPKAQKNIPVLPWMRNPVDISAIEECRLPLLPRLDPRLDEALKTMGISSLFPVQVAVWQETIGPGAFERDLCINSPTGSGKTLAYALPIVQTLASCSVKCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISALIKRPRLEAGCCYDPDDRAERLQSAVDILVATPGRLMDHINTTKGFTLEHLRYLVVDETDRLLREAYQSWLPTVLKLAQPSYDVFAPHPQNFSTLISSSFKTIRRFGVERGFKGKAQPRLVKMVLSATLTQDPSKLAQLDLHHPLFLTTGQTRYQFPEKLESYKVICESEDKPVYLVALLQQLKGEKSIVFTSSVQSTHWLCSLLKFFGDLNIKIKEYSGLQRQALRSKTLKAFRKGDVDVLVCSDAMTRGMDVEGVKNVINYDVPPYIKTHIHRAGRTARAGQAGRCFTLLRTDEMKRFKKLLRKAEGSSCKAYTLPSDSIKSLQSVYVTAFDKLKESIQSEAPRRRKFDFKPSGPGRGKGTHKSKN*

Click here to download the sequence:
Link to NCBI Protein BLAST