Transcript Information: S_Transcript_97254.p1


Annotated TAIR IDAT5G60870.1
Annotated Gene NameRegulator of chromosome condensation (RCC1) family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:24485788-24487771 | Reverse length=445
E-Value3.6E-118
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.6157893607074
Replicate 21.3395265088491
Replicate 31.1197375479329
Condition 2: 8 Hour
Replicate 10.83778319103023
Replicate 21.1984918914139
Replicate 31.5986885703736
Condition 3: 24 Hour
Replicate 11.4823313797189
Replicate 20.56659528940868
Replicate 30.6305511101279


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_97254.p1 GENE.S_Transcript_97254~~S_Transcript_97254.p1 ORF type:complete len:280 (+),score=58.88,RCC1|PF00415.14|0.00013,RCC1|PF00415.14|9.2e-09,RCC1|PF00415.14|1.6e-10,RCC1|PF00415.14|1.7e-13,RCC1_2|PF13540.2|0.0002,RCC1_2|PF13540.2|1e-05,RCC1_2|PF13540.2|8.7e-12,RCC1_2|PF13540.2|12 S_Transcript_97254:526-1365(+)
ATGTCAAGTCTATGGCTCTTGGTGGCCTTCATTCTGTTGCTCTTACTTCCCTTGGACAAGTCTTCACTTGTTTGCAGGGGTTATGGTGGTTTTGGTGCTCTTGGACATTCTGTTTTTACAAGAGAACTGGTTCCTAGATTGGTTGAAGGTTCCTGGAGTGAGAAATTTAAACATATTGCAACCAGTGGAACTCACACTGCAGCTATCGCTGAATCAGGTGAACTTTACACATGGGGTCGAGAAGAAGGTGATGGGAGACTAGGTCTTGGCCCTGGACGTGGCCCTGATCAGGCAGGTGGGCTTAGCATCCCAAGCAAAGTAAAAGCTTTACCTGTTCCTGCAGCTGCTGTAGCTTGTGGTGGCTTTTTCACGTTAGCCCTAACTGAAGAAGAACAGCTTTGGAATTGGGGAGCCAATTCAAATTATGAGCTTGGAAGGGGTGATAAGATAGGCGGTTGGCAACCAAGATTGGTTTCTACTGTGGAAAATTTGCGTATGGTTCAAGTAGCTTGTGGTGGATATCATTCACTTGCTCTGACTGAGGATGGAAAGGTGCTTTCTTGGGGACACGGTGGACATGGTCAATTGGGTCATTCTTCAAATCAAAATCAGAAGGTGCCTACAGTGGTTGAGGCTTTGGCTCACGAGCACGTTATCTCGATTGCCTGTGGAGGTTCATCTTCAGCAGCCGTAACTGGTAAAAACAAACATCTCCATTGTTCAGTAGTTATGAAATATCACACTATTCTATGGGTACTATTTGACAATTTCTCACTTGAAAGTAAAAAAAAAAAGTTGGAGGTTATTGTAGTTGGAGCTTTGTACTCACAGTACTTCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_97254.p1 GENE.S_Transcript_97254~~S_Transcript_97254.p1 ORF type:complete len:280 (+),score=58.88,RCC1|PF00415.14|0.00013,RCC1|PF00415.14|9.2e-09,RCC1|PF00415.14|1.6e-10,RCC1|PF00415.14|1.7e-13,RCC1_2|PF13540.2|0.0002,RCC1_2|PF13540.2|1e-05,RCC1_2|PF13540.2|8.7e-12,RCC1_2|PF13540.2|12 S_Transcript_97254:526-1365(+)
MSSLWLLVAFILLLLLPLDKSSLVCRGYGGFGALGHSVFTRELVPRLVEGSWSEKFKHIATSGTHTAAIAESGELYTWGREEGDGRLGLGPGRGPDQAGGLSIPSKVKALPVPAAAVACGGFFTLALTEEEQLWNWGANSNYELGRGDKIGGWQPRLVSTVENLRMVQVACGGYHSLALTEDGKVLSWGHGGHGQLGHSSNQNQKVPTVVEALAHEHVISIACGGSSSAAVTGKNKHLHCSVVMKYHTILWVLFDNFSLESKKKKLEVIVVGALYSQYF*

Click here to download the sequence:
Link to NCBI Protein BLAST