Transcript Information: S_Transcript_97255.p1


Annotated TAIR IDAT5G60870.1
Annotated Gene NameRegulator of chromosome condensation (RCC1) family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:24485788-24487771 | Reverse length=445
E-Value3.6E-148
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.25754517324368
Replicate 20.42702173337125
Replicate 31.5468101231407
Condition 2: 8 Hour
Replicate 11.5822063783679
Replicate 21.5155123272073
Replicate 31.5814983706922
Condition 3: 24 Hour
Replicate 10.63420629488822
Replicate 20.95041790481457
Replicate 30.40680716782445


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_97255.p1 GENE.S_Transcript_97255~~S_Transcript_97255.p1 ORF type:complete len:310 (+),score=77.62,RCC1|PF00415.14|0.00015,RCC1|PF00415.14|1.1e-08,RCC1|PF00415.14|1.9e-10,RCC1|PF00415.14|2e-13,RCC1|PF00415.14|5.6e-07,RCC1_2|PF13540.2|0.00023,RCC1_2|PF13540.2|1.2e-05,RCC1_2|PF13540.2|1e-11,RCC1_2|PF13540.2|0.018,RCC1_2|PF13540.2|1.5 S_Transcript_97255:526-1455(+)
ATGTCAAGTCTATGGCTCTTGGTGGCCTTCATTCTGTTGCTCTTACTTCCCTTGGACAAGTCTTCACTTGTTTGCAGGGGTTATGGTGGTTTTGGTGCTCTTGGACATTCTGTTTTTACAAGAGAACTGGTTCCTAGATTGGTTGAAGGTTCCTGGAGTGAGAAATTTAAACATATTGCAACCAGTGGAACTCACACTGCAGCTATCGCTGAATCAGGTGAACTTTACACATGGGGTCGAGAAGAAGGTGATGGGAGACTAGGTCTTGGCCCTGGACGTGGCCCTGATCAGGCAGGTGGGCTTAGCATCCCAAGCAAAGTAAAAGCTTTACCTGTTCCTGCAGCTGCTGTAGCTTGTGGTGGCTTTTTCACGTTAGCCCTAACTGAAGAAGAACAGCTTTGGAATTGGGGAGCCAATTCAAATTATGAGCTTGGAAGGGGTGATAAGATAGGCGGTTGGCAACCAAGATTGGTTTCTACTGTGGAAAATTTGCGTATGGTTCAAGTAGCTTGTGGTGGATATCATTCACTTGCTCTGACTGAGGATGGAAAGGTGCTTTCTTGGGGACACGGTGGACATGGTCAATTGGGTCATTCTTCAAATCAAAATCAGAAGGTGCCTACAGTGGTTGAGGCTTTGGCTCACGAGCACGTTATCTCGATTGCCTGTGGAGGTTCATCTTCAGCAGCCGTAACTGACACAGGTGACACTGCATATTTGAAAACAGAGACAGGGAAGTTATACATGTGGGGAAACGCAAAGGACTCTCAACTAGGGGTTCCTGGGCTGCCTGAGATACAGTCTTCGCCTGTTGAAGTGAACTTTCTGATGGAAGATGATGGTTTGGGGCCACCCAGTGTTCGATCTGTTGCCATTGGTGCATCTCATGCCATGTGTTTGATTTCAAGAGGTGAAGTCGCTAGGAAGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_97255.p1 GENE.S_Transcript_97255~~S_Transcript_97255.p1 ORF type:complete len:310 (+),score=77.62,RCC1|PF00415.14|0.00015,RCC1|PF00415.14|1.1e-08,RCC1|PF00415.14|1.9e-10,RCC1|PF00415.14|2e-13,RCC1|PF00415.14|5.6e-07,RCC1_2|PF13540.2|0.00023,RCC1_2|PF13540.2|1.2e-05,RCC1_2|PF13540.2|1e-11,RCC1_2|PF13540.2|0.018,RCC1_2|PF13540.2|1.5 S_Transcript_97255:526-1455(+)
MSSLWLLVAFILLLLLPLDKSSLVCRGYGGFGALGHSVFTRELVPRLVEGSWSEKFKHIATSGTHTAAIAESGELYTWGREEGDGRLGLGPGRGPDQAGGLSIPSKVKALPVPAAAVACGGFFTLALTEEEQLWNWGANSNYELGRGDKIGGWQPRLVSTVENLRMVQVACGGYHSLALTEDGKVLSWGHGGHGQLGHSSNQNQKVPTVVEALAHEHVISIACGGSSSAAVTDTGDTAYLKTETGKLYMWGNAKDSQLGVPGLPEIQSSPVEVNFLMEDDGLGPPSVRSVAIGASHAMCLISRGEVARK*

Click here to download the sequence:
Link to NCBI Protein BLAST