Transcript Information: S_Transcript_97257.p1


Annotated TAIR IDAT5G60870.1
Annotated Gene NameRegulator of chromosome condensation (RCC1) family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:24485788-24487771 | Reverse length=445
E-Value5.4E-206
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.7627903824658
Replicate 23.0850510821949
Replicate 32.6179307576297
Condition 2: 8 Hour
Replicate 14.2018247870622
Replicate 22.843879064372
Replicate 33.8386589966598
Condition 3: 24 Hour
Replicate 11.5272905830288
Replicate 21.9206619979955
Replicate 33.2596286201527


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_97257.p1 GENE.S_Transcript_97257~~S_Transcript_97257.p1 ORF type:complete len:472 (+),score=107.15,RCC1|PF00415.14|1.9e-05,RCC1|PF00415.14|2.3e-08,RCC1|PF00415.14|1.1e-09,RCC1|PF00415.14|2.9e-07,RCC1|PF00415.14|2.3e-11,RCC1|PF00415.14|3.6e-13,RCC1|PF00415.14|5.5e-06,RCC1_2|PF13540.2|4.7,RCC1_2|PF13540.2|32,RCC1_2|PF13540.2|6.7e-05,RCC1_2|PF13540.2|0.0004,RCC1_2|PF13540.2|5.9e-07,RCC1_2|PF13540.2|1.7e-11,RCC1_2|PF13540.2|2.2e-05,RCC1_2|PF13540.2|0.068 S_Transcript_97257:60-1418(+)
ATGACAACCTTCTCCACTCTCCGCCACCACACCACCACCGTCCGTACCTTCTTCTCCTTCATCAAAAAACCCACCAACACCACCACAAAACCCTCTCACAAACCCCCATTACTCTACCAACCCAGCAACCCAAACAACACCCATCTCCACCTCCAACTTCTCTCATGGGGTCGTGGCTCATCGGGTCAACTCGGTTCCCCCACTGAGTCAACTCGTCTTTACCCGACCCCAGTTTGTTCCCTTCTTGTCCCCCCTTCTTTTCAGCTCTCACCATCACAAGGCTCCATTTTGAGCCCCTCAAAACCATCAAGCTCAGATTTTGAGGTGGGTGTCTCATGTGGGTTGTTTCATTCTTCACTGCTTGTTAATGAGCAGGTGTGGATTTGGGGTAAAGGGGATGGTGGTAGGCTTGGTTTTGGTCATGAAAACAATGTTTTTGAACCAACTTTGAATACCCATTTGGACAATGTCAAGTCTATGGCTCTTGGTGGCCTTCATTCTGTTGCTCTTACTTCCCTTGGACAAGTCTTCACTTGGGGTTATGGTGGTTTTGGTGCTCTTGGACATTCTGTTTTTACAAGAGAACTGGTTCCTAGATTGGTTGAAGGTTCCTGGAGTGAGAAATTTAAACATATTGCAACCAGTGGAACTCACACTGCAGCTATCGCTGAATCAGGTGAACTTTACACATGGGGTCGAGAAGAAGGTGATGGGAGACTAGGTCTTGGCCCTGGACGTGGCCCTGATCAGGCAGGTGGGCTTAGCATCCCAAGCAAAGTAAAAGCTTTACCTGTTCCTGCGGCTGCTGTAGCTTGTGGAGGCTTTTTCATGTTAGCCCTAACTGAAGAAGGACAGCTTTGGAATTGGGGAGCCAATTCAAATTATGAGCTTGGAAGGGGTGATAAGATAGGCGGTTGGCAACCAAGATTGGTTTCTACTGTGGAAAATTTGCGTATGGTTCAAGTAGCTTGTGGTGGATATCATTCACTTGCTCTGACTGAGGATGGAAAGGTGCTTTCTTGGGGACACGGTGGACATGGTCAATTGGGTCATTCTTCAAATCAAAATCAGAAGGTGCCTACAGTGGTTGAGGCTTTGGCTCACGAGCACGTTATCTCGATTGCCTGTGGAGGTTCATCTTCAGCAGCTGTAACTGAGACAGGGAAGTTATACATGTGGGGAAACGCAAAGGACTCTCAACTAGGGGTTCCTGGGCTGCCTGAGATACAGTCTTCGCCTGTTGAAGTGAACTTTCTGATGGAAGATGATGGTTTGGGGCCACCCAGTGTTCGATCTGTTGCCATTGGTGCATCTCATGCCATGTCTTTGGTTTCACGAGGTGAAGCAGCTAGGAAGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_97257.p1 GENE.S_Transcript_97257~~S_Transcript_97257.p1 ORF type:complete len:472 (+),score=107.15,RCC1|PF00415.14|1.9e-05,RCC1|PF00415.14|2.3e-08,RCC1|PF00415.14|1.1e-09,RCC1|PF00415.14|2.9e-07,RCC1|PF00415.14|2.3e-11,RCC1|PF00415.14|3.6e-13,RCC1|PF00415.14|5.5e-06,RCC1_2|PF13540.2|4.7,RCC1_2|PF13540.2|32,RCC1_2|PF13540.2|6.7e-05,RCC1_2|PF13540.2|0.0004,RCC1_2|PF13540.2|5.9e-07,RCC1_2|PF13540.2|1.7e-11,RCC1_2|PF13540.2|2.2e-05,RCC1_2|PF13540.2|0.068 S_Transcript_97257:60-1418(+)
MTTFSTLRHHTTTVRTFFSFIKKPTNTTTKPSHKPPLLYQPSNPNNTHLHLQLLSWGRGSSGQLGSPTESTRLYPTPVCSLLVPPSFQLSPSQGSILSPSKPSSSDFEVGVSCGLFHSSLLVNEQVWIWGKGDGGRLGFGHENNVFEPTLNTHLDNVKSMALGGLHSVALTSLGQVFTWGYGGFGALGHSVFTRELVPRLVEGSWSEKFKHIATSGTHTAAIAESGELYTWGREEGDGRLGLGPGRGPDQAGGLSIPSKVKALPVPAAAVACGGFFMLALTEEGQLWNWGANSNYELGRGDKIGGWQPRLVSTVENLRMVQVACGGYHSLALTEDGKVLSWGHGGHGQLGHSSNQNQKVPTVVEALAHEHVISIACGGSSSAAVTETGKLYMWGNAKDSQLGVPGLPEIQSSPVEVNFLMEDDGLGPPSVRSVAIGASHAMSLVSRGEAARK*

Click here to download the sequence:
Link to NCBI Protein BLAST