Transcript Information: S_Transcript_9727.p1


Annotated TAIR IDAT3G50670.1
Annotated Gene NameU1 small nuclear ribonucleoprotein-70K
Annotated Gene Symbol(s)U1-70K, U1SNRNP
Annotation TypeOrtholog
Chromosome Positionchr3:18826476-18829492 | Reverse length=427
E-Value3.6E-99
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 118.974084213971
Replicate 219.202798318578
Replicate 316.991224447391
Condition 2: 8 Hour
Replicate 127.150381190794
Replicate 227.03265043967
Replicate 326.151387107963
Condition 3: 24 Hour
Replicate 121.642616050866
Replicate 221.509635986811
Replicate 319.26683947613


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_9727.p1 GENE.S_Transcript_9727~~S_Transcript_9727.p1 ORF type:complete len:216 (+),score=33.48,U1snRNP70_N|PF12220.4|5.2e-20,U1snRNP70_N|PF12220.4|4e+03 S_Transcript_9727:174-821(+)
ATGGGTGACTTCAACAACAACAACAATAACGATGCTTTTCTCCGCAACCAAAACGCTGCCGTTCAGGGCCGCACCAAGGCCCAGAATCGCGCTAATGTTCTTCAGCTCAAAATGATTGGACAATCTCACCCAACTGGTTTGACGCCTAATCTACTGAAGCTTTTCGAGCCTCGACCTCCGTTGGAGTACAAATCACCACCTGAGAAAAGAAAATGTCCACCATATACTGGAATGGCGCAATTTGTGGCTCTCTTTGCTGAGCCTGGGGATCCTGAGTACGCCCCACCCGTTCCTGAAGTTGAGACCCCTTCACAAAGAAGGGCCAGAATCCACCAGTTACGACTTGAGAAGGGTGCAGCAAAGGCTGCTGAAGAGTTTGAGAAATATGATCCACAAAATGATCCTAATGTCACTGGAGATCCATACAAGACACTTTTTGTAGCCAGGCTGAGTTATGAGACCTCAGAGAGCAGACTAAAAAGGGAGTTTGAAACTTATGGGCCCATAAAGCGGGTAGGTATTCATAACCATCCCTATCAGGGGACAGGTTATTGCGTTTTATCTTCGGTAAGAGGTTCACTTGTGTTTATGGCTGGTTTGCTATTTTGTGATTGGTATTTCCTCCATAAATTTGATCTTTTTCGATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_9727.p1 GENE.S_Transcript_9727~~S_Transcript_9727.p1 ORF type:complete len:216 (+),score=33.48,U1snRNP70_N|PF12220.4|5.2e-20,U1snRNP70_N|PF12220.4|4e+03 S_Transcript_9727:174-821(+)
MGDFNNNNNNDAFLRNQNAAVQGRTKAQNRANVLQLKMIGQSHPTGLTPNLLKLFEPRPPLEYKSPPEKRKCPPYTGMAQFVALFAEPGDPEYAPPVPEVETPSQRRARIHQLRLEKGAAKAAEEFEKYDPQNDPNVTGDPYKTLFVARLSYETSESRLKREFETYGPIKRVGIHNHPYQGTGYCVLSSVRGSLVFMAGLLFCDWYFLHKFDLFR*

Click here to download the sequence:
Link to NCBI Protein BLAST