Transcript Information: S_Transcript_9728.p1


Annotated TAIR IDAT3G50670.1
Annotated Gene NameU1 small nuclear ribonucleoprotein-70K
Annotated Gene Symbol(s)U1-70K, U1SNRNP
Annotation TypeOrtholog
Chromosome Positionchr3:18826476-18829492 | Reverse length=427
E-Value7.5E-114
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 119.416628452198
Replicate 231.968531807828
Replicate 323.90028043487
Condition 2: 8 Hour
Replicate 132.314494511166
Replicate 229.676942073107
Replicate 336.215190063565
Condition 3: 24 Hour
Replicate 126.748836927258
Replicate 224.05139187694
Replicate 324.835992705038


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_9728.p1 GENE.S_Transcript_9728~~S_Transcript_9728.p1 ORF type:3prime_partial len:196 (+),score=44.01,U1snRNP70_N|PF12220.4|4.1e-20,U1snRNP70_N|PF12220.4|3.1e+03,RRM_1|PF00076.18|2.9e-13,RRM_6|PF14259.2|6.1e-07 S_Transcript_9728:165-749(+)
ATGGGTGACTTCAACAACAACAACAATAACGATGCTTTTCTCCGCAACCAAAACGCTGCCGTTCAGGGCCGCACCAAGGCCCAGAATCGCGCTAATGTTCTTCAGCTCAAAATGATTGGACAATCTCACCCAACTGGTTTGACGCCTAATCTACTGAAGCTTTTCGAGCCTCGACCTCCGTTGGAGTACAAATCACCACCTGAGAAAAGAAAATGTCCACCATATACTGGAATGGCGCAATTTGTGGCTCTCTTTGCTGAGCCTGGGGATCCTGAGTACGCCCCACCCGTTCCTGAAGTTGAGACCCCTTCACAAAGAAGGGCCAGAATCCACCAGTTACGACTTGAGAAGGGTGCAGCAAAGGCTGCTGAAGAGTTTGAGAAATATGATCCACAAAATGATCCTAATGTCACTGGAGATCCATACAAGACACTTTTTGTAGCCAGGCTGAGTTATGAGACCTCAGAGAGCAGACTAAAAAGGGAGTTTGAAACTTATGGGCCCATAAAGCGGGTGAAGATGGTTTATGACAAGGATACCAACAAACCCAAAGGCTATGCTTTCATTGAATATGCTCATACAAGG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_9728.p1 GENE.S_Transcript_9728~~S_Transcript_9728.p1 ORF type:3prime_partial len:196 (+),score=44.01,U1snRNP70_N|PF12220.4|4.1e-20,U1snRNP70_N|PF12220.4|3.1e+03,RRM_1|PF00076.18|2.9e-13,RRM_6|PF14259.2|6.1e-07 S_Transcript_9728:165-749(+)
MGDFNNNNNNDAFLRNQNAAVQGRTKAQNRANVLQLKMIGQSHPTGLTPNLLKLFEPRPPLEYKSPPEKRKCPPYTGMAQFVALFAEPGDPEYAPPVPEVETPSQRRARIHQLRLEKGAAKAAEEFEKYDPQNDPNVTGDPYKTLFVARLSYETSESRLKREFETYGPIKRVKMVYDKDTNKPKGYAFIEYAHTR

Click here to download the sequence:
Link to NCBI Protein BLAST